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L1_008_000M1_scaffold_2628

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2628_1
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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349..1212
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YI51_9DELT
Integrase family protein {ECO:0000313|EMBL:EHJ48864.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
integrase family protein
L1_008_000M1_scaffold_2628_2
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1229..1618)
DNA (390bp) protein (130aa)
Putative conjugal transfer protein, transcriptional repressor protein TrbA n=2 Tax=Methylomicrobium RepID=G4T4I3_META2
Putative conjugal transfer protein, transcriptional repressor protein TrbA {ECO:0000313|EMBL:CCE25739.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
trbA; conjugal transfer protein TrbA
L1_008_000M1_scaffold_2628_3
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1698..2537
DNA (840bp) protein (280aa)
Plasmid stablization protein ParB n=1 Tax=Sphingobium baderi LL03 RepID=T0I897_9SPHN
Plasmid stablization protein ParB {ECO:0000313|EMBL:EQB05819.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
L1_008_000M1_scaffold_2628_4
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2711..4153
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. TJI49 RepID=F0G073_9BURK
Burkholderia pseudomallei strain MSHR1950 plasmid pBPSE01, complete sequence {ECO:0000313|EMBL:AJL34975.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;"
hypothetical protein
L1_008_000M1_scaffold_2628_5

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comp(4195..4617)
DNA (423bp) protein (141aa)
TraM DNA transfer protein n=1 Tax=uncultured bacterium RepID=J9Z8R6_9BACT
TraM DNA transfer protein {ECO:0000313|EMBL:AFS51561.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TraM protein
L1_008_000M1_scaffold_2628_6

Not on your lists

comp(4629..5363)
DNA (735bp) protein (245aa)
TraL protein n=1 Tax=uncultured bacterium RepID=Q1H9W4_9BACT
TraL protein {ECO:0000313|EMBL:CAJ43361.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conjugal transfer protein TraL
L1_008_000M1_scaffold_2628_7
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5356..5820)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVV8_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI77998.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
L1_008_000M1_scaffold_2628_8
unknown

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5843..6322
DNA (480bp) protein (160aa)

This feature has no annotations

L1_008_000M1_scaffold_2628_9
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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6264..6530
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBS6_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV42545.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
traJ; Conjugal transfer relaxosome component TraJ
L1_008_000M1_scaffold_2628_10
Sphingomonas sp. A1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6578..8113
DNA (1536bp) protein (512aa)
TraI n=1 Tax=Sphingomonas sp. A1 RepID=Q4AC74_9SPHN
TraI {ECO:0000313|EMBL:BAE19709.1}; TaxID=90322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. A1.;"
conjugal transfer relaxase TraI
L1_008_000M1_scaffold_2628_11

Not on your lists

8116..10050
DNA (1935bp) protein (645aa)
TraG DNA processing protein, coupling protein n=1 Tax=uncultured bacterium RepID=U3LQB4_9BACT
TraG DNA processing protein, coupling protein {ECO:0000313|EMBL:AGH89292.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
conjugal transfer coupling protein TraG
L1_008_000M1_scaffold_2628_12
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10034..10552
DNA (519bp) protein (173aa)
Conjugative transfer signal peptidase TraF n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBS9_BILWA
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:EFV42548.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
conjugal transfer peptidase TraF
L1_008_000M1_scaffold_2628_13
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10545..12881
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAD09
Uncharacterized protein {ECO:0000313|EMBL:EFV42549.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
hypothetical protein
L1_008_000M1_scaffold_2628_14
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12914..13141
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YBT2_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV42551.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
traD
L1_008_000M1_scaffold_2628_15
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13242..13481
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=T5QZG5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW42922.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Displaying 15 items

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