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L1_008_000M1_scaffold_678

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_678_1
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..139
DNA (138bp) protein (46aa)
Transposase (Fragment) n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1URW5_9DELT
Transposase {ECO:0000313|EMBL:EGW51700.1}; Flags: Fragment;; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
transposase IS4 family protein
L1_008_000M1_scaffold_678_2
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(713..1300)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AH01_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKH47216.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
glycosyltransferase
L1_008_000M1_scaffold_678_3
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1351..2571)
DNA (1221bp) protein (407aa)
Glycosyl transferase, family 2 n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VZB5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KKH47217.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
L1_008_000M1_scaffold_678_4
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2574..3824)
DNA (1251bp) protein (417aa)
Uncharacterized protein {ECO:0000313|EMBL:KKH47218.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;"
ABC transporter ATP-binding protein id=3556188 bin=GWF2_Lentisphaerae_38_69 species=Pseudanabaena biceps genus=Pseudanabaena taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_678_5
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3835..4656)
DNA (822bp) protein (274aa)
ABC-2 type transporter n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q30XA5_DESDG
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
L1_008_000M1_scaffold_678_6
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4663..5601)
DNA (939bp) protein (313aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
GDP-L-fucose synthase n=2 Tax=Desulfovibrio RepID=D9YCD6_9DELT
NAD-dependent epimerase/dehydratase
L1_008_000M1_scaffold_678_7
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5605..6753)
DNA (1149bp) protein (383aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
GDP-mannose 4,6-dehydratase n=2 Tax=Desulfovibrio RepID=G1UTI6_9DELT
GDP-mannose 4,6-dehydratase
L1_008_000M1_scaffold_678_8
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7123..8730)
DNA (1608bp) protein (536aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UTI5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51055.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_678_9
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8872..9408)
DNA (537bp) protein (179aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Superoxide dismutase [Cu-Zn] n=2 Tax=Desulfovibrio RepID=D9YCD9_9DELT
copper/zinc binding superoxide dismutase
L1_008_000M1_scaffold_678_10
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9781..10413
DNA (633bp) protein (211aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Desulfovibrio RepID=D9YCE0_9DELT
ribosomal RNA methyltransferase RrmJ/FtsJ
L1_008_000M1_scaffold_678_11
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10516..11253
DNA (738bp) protein (246aa)
Probable transcriptional regulatory protein HMPREF0326_00088 n=2 Tax=Desulfovibrio RepID=D9YCE1_9DELT
Probable transcriptional regulatory protein HMPREF1022_01905 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_678_12
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11445..11948
DNA (504bp) protein (168aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
ruvC; Holliday junction resolvase (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Desulfovibrio RepID=D9YCE2_9DELT
L1_008_000M1_scaffold_678_13
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12060..13172)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCE3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51050.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_678_14
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13185..13778)
DNA (594bp) protein (198aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Desulfovibrio RepID=D9YCE4_9DELT
cyclophilin type peptidyl-prolyl cis-trans isomerase
L1_008_000M1_scaffold_678_15
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14229..14936
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCE5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51048.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_678_16
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15253..17895
DNA (2643bp) protein (881aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=T5R628_9DELT
L1_008_000M1_scaffold_678_17
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17895..19481
DNA (1587bp) protein (529aa)
Integral membrane protein MviN n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=T5R2U3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51046.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
virulence factor MVIN family protein
L1_008_000M1_scaffold_678_18
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19520..20041)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UTH5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51045.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
membrane-bound metal-dependent hydrolase
L1_008_000M1_scaffold_678_19
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20082..20885)
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UTH4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51044.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Zn-dependent hydrolase
L1_008_000M1_scaffold_678_20
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21023..23347)
DNA (2325bp) protein (775aa)
Ribonucleoside-diphosphate reductase n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YCF1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51043.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
ribonucleotide-diphosphate reductase subunit alpha
L1_008_000M1_scaffold_678_21
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23502..25046)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YIC0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51042.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_678_22
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25047..26696)
DNA (1650bp) protein (550aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCF2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51041.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
iron-sulfur cluster-binding protein
L1_008_000M1_scaffold_678_23
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26748..29081)
DNA (2334bp) protein (778aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UTH0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51040.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
L1_008_000M1_scaffold_678_24
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29794..30774
DNA (981bp) protein (327aa)
Flagellar motor switch protein FliM n=2 Tax=Desulfovibrio RepID=D9YCF5_9DELT
Flagellar motor switch protein FliM {ECO:0000313|EMBL:EGW51037.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
flagellar motor switch protein FliM
L1_008_000M1_scaffold_678_25
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30829..35043)
DNA (4215bp) protein (1405aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCF6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51036.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
CoA-substrate-specific enzyme activase
L1_008_000M1_scaffold_678_26
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35468..36391)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCF7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51035.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_678_27
unknown

Not on your lists

comp(36416..36595)
DNA (180bp) protein (60aa)

This feature has no annotations

L1_008_000M1_scaffold_678_28
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36617..37696
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCF8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51034.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
ankyrin repeat-containing protein
L1_008_000M1_scaffold_678_29
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37727..39559
DNA (1833bp) protein (611aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UTG3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51172.1}; Flags: Fragment;; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_678_30
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39567..39890)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YCG0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW51171.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Displaying 30 items

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