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L1_008_000M1_scaffold_3145_14

Organism: dasL1_008_000M1_concoct_91_fa

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 12 / 38
Location: comp(12201..15641)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 1125.0
  • Bit_score: 2181
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNC2_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 1125.0
  • Bit_score: 2181
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 1142.0
  • Bit_score: 1938
  • Evalue 0.0

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Taxonomy

Desulfovibrio sp. 6_1_46AFAA → Desulfovibrio → Desulfovibrionales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3441
ATGCAAAATTTCAGCGCACTGCTTGCAAGCCGGGACGGACAACTCTATCTGGAGCGCAGCGGCATGGCCACGCGTTGCCGTCTGGCCTGCGAGGCTCTGGCCCAAGGGCGCGGCGCGGTGCTTCTCGCCCGCAACCGTGAGGAATTCCATACGGCCCGCGCCCTGCTGACGCTTTTTCTGCCTCAGCTTTCCCTGGGCGATATCCCCATCGATCAGGCCGTATGGGAAAGTCCCTGCCTGAGCCTGCCCGCCATGAGCCAGTGGCGGGACAGGGCCTTCTGGGCCGCCCGCATGGCCGCGCTGTATGCTTTGGCCCAGGGCGGCCCGCGCTGCGTGGTAGCCGGGGTGGAAAGCGTGCTGCTGCGCTATATGCCCCTGCATTTTTTTGATTCGCGCAGTCTGGGCCTCTCGCGCGGCGGCGAATATTCGCCGGAGCTCATCCTGGACCAAGCCGTGGAGTGGGGCTATGAGCGCGTTTCCCTGGTGACGCGTCCCGGCGACATGGCCCGGCGCGGCGATATTCTGGACATATTCCCTCCCGGTTACGCCAAACCCGTACGACTGGAATTTTTCGGCGACGCCATTGAGGAAATGCGCCTTTTTGACGCTGAAAGCCAGCGTTCCCTGCGGCCTCTCGACGAACTGACTCTCTTGCCCGTGAGCCCGTTGGCTCTGGATAAGAACGGCCTGGCGGCGGCCCGCAAGCGCTGCGACCAGCTGTTCAGCGAGAGCCGGATCAGCGAAAACGAATGTTATTCCTTCAAGAAGGCTCTGGACGGGGGCGGCGCGGGCATCCTGCCCGGCGTGCTGTGGGATTCGCCCAGCCTGCTGGAAGAATGGCTGCCCGCCGACAGCCTCTGGCTGCTGCCCGGCGAGGCGGACAGCGCCGAAGCCCTGCGCGACGGGCGGCTGGCGCTCAAAGAGGCTCTGGAGGCTGAAGACGCGCCCTTGCAGCAACCGGCGGCCCTGGCTCTGCGCAAGCATTCGCAGCCCGCGCCCTGGCGGAATTTCCAGTGCGCCTTCGCCGAACCGCTGGTCATGGGCGTCGAAGAGCGGGGGACGGACTTTCAGGAGCGCGCTCTGCACGGCTTCAGCGACCTTTTCCCCCTGCCCGCCGCGCAGGACCGGCCCTGGCAGCATCTGGCCGCCGGGCTCAAGGAATGGCAGGGCCGACGCCGCCAGGTTATTCTGAGCTTTTCCTCCGAGCGGGGACGCAACAAATTCTTGAAACTGGCCGAGCAGGACGGCATCATTCCGGCGTTGCGTTACGCGCCGGAAGGACACGGCCTGTTTGCCCTGGTTTCGCCCTTCCGTTCCGGCGTGGAACTGGTCTGGGACAATAGCCTGGTTCTGGGCGAGGACATCATCTATCCCCGCGCGGAAAAAACACCACGCGCCGCGTCCCGGGCCTTCAAGGGCCTGGACAATTTCGACGACCTCAAGAAAGGCGACCTGCTGGTCCACCGCGATTACGGCATCGGCCGTTTCGCGGGCCTGCATCATCTGGACCTCAACAGCGCGGCCAACGATTTTCTGCTCATTGAATATTCCGGGCGGGACAAGCTCTATGTGCCCGCCGACCGTCTGGGTCTGATCCAGCGCTTCAAAGGGACCGAGGGCGTGGAGCCGGCCCTGGACCGCCTGGGCGGCCCGGCCTGGGCCGCGGGCAAGGAAAAGGCCCGCAAGGCCATTGAAAAAATCGCGGCCGACCTGGTGGAAATGTACGCCTACCGCAAGGTTGCCAAGGGCTTCCGCTACGACCCGCCGGGCGAGCTGTACCACGAGTTCGAGGCTACCTTCGGCTTTGAGGAAACGCCGGACCAGGCCAAGGCCATCCAGGACGTGCTGGACGACATGGACAGAGGCGAGCCCATGGACCGCCTGATCTGCGGCGACGTGGGCTTCGGCAAGACCGAAGTGGCCCTGCGCGCGGCCTTCCGCGCCGCCGCCGAGGGGCGGCAGGTGGCTTTGCTCTGTCCTACCACGGTACTGGCCGAACAGCATTACCAGACCTTCCGGGCGCGCCTGGCCGGTTTCCCGGTCAATGTGGGGCTGCTGAGCCGTTTTGTGACCAGGCCCCGGCAGAAGGAAGTGCTCAAAGCCGCGGCCGCCGGGCAGATCGACATTCTCATCGGCACCCACCGCATTCTCTCCAGCGACGTGAAGCTGCCCAATCTGGCCCTGCTGGTGCTGGACGAGGAGCAGCGTTTCGGCGTGCGCCACAAGGAAAAGCTCAAGGCCCTGAAAAAAAATGTGGACGTGCTGACCCTTACGGCCACGCCCATTCCGCGCACCTTGCAGCTCTCCATGTCCGGCATCCGCGAGCTGTCCATTATCGAAACCGCGCCGCAGGACCGCAAGCCGGTAGCCACGGCGGTGCTGCGCCGCGACGACGCGGTTCTGGGCAAGGTCATTGAGCGTGAAATTGAGCGCGAAGGGCAGGTTTTCTGGGTTTACAACCGGGTTCAGGGTCTGGAGCGCGTGGCGGAATACGTGCGCAAGCTCGCGCCCCAGGCCAGGGTGGGCATGGCCCACGGCCAGATGTCCGAAACCGAATTGGAAACCACCATGCACAAGTTCTGGCACGGCGAGCTGGACGTGCTGGTCTGTACCTCCATTGTGGAATCTGGCCTGGACTTCCCGCGCGCCAACACCCTGGTGGTGGATCAGGCCCAGATGTTCGGCCTGGGCCAGCTTTATCAGTTGCGGGGCCGCGTGGGCCGCAGCGACCGGCAGGCCTATGCCTTCTTTGTGGTGCCCGATGCCGAGCGCCTGACGGCCGTGGCCGAGGAGCGCCTGCGCATCATCATGGACATGGACTATCTGGGCGCGGGTTTTCAGGTGGCCATGGAGGATCTGCGTCTGCGCGGGGCGGGCAACATCCTGGGAGAGGTGCAGTCCGGGCATATGAGCCGGGTGGGACTGGAGCTCTATCTGGAAATGCTGGAGGAAGCCGTGGGCCGCCTCAAAGGCACGCCCTCTGCTCTGGCCGTGGAAACCGAACTGACTTTGGGCTTGCCTGCCCATATTCCCGCGTCGTACATTGATGACGGCCGTGAGCGCCTGCGCTGCTACAAGGCCCTGACCTCGGCCGTGGGCGGCGCGGCCAGAGAAGAGGCCGCGCTTTCCATGCGCGACCGCTTCGGTCCTTTCCCCGAGGAATTGACCAACTTTCTGGCAGTGCTGGACTTCAAGCAATTCCTTACGGAGCTGCAAGTGCAGCGGGCCGACGTGCACCGCGACCATCTGCGTATGTTCTGGCCTGACGGCCAGACCGCCGTGCAGCCGGAGCGCATTGTGGAACTGGCGGCCGAAATGCCGGGCGCGCGCCTGCATCCCCCGGCGGGCCTGACCTTGCCGTTGTCCGCTGACTTGCCCTTTAGCGAAGGTCTGCAAAAAATGCGCGCGGCCCTGGAGGAAATCCGCACGGCGGCTTCCTGA
PROTEIN sequence
Length: 1147
MQNFSALLASRDGQLYLERSGMATRCRLACEALAQGRGAVLLARNREEFHTARALLTLFLPQLSLGDIPIDQAVWESPCLSLPAMSQWRDRAFWAARMAALYALAQGGPRCVVAGVESVLLRYMPLHFFDSRSLGLSRGGEYSPELILDQAVEWGYERVSLVTRPGDMARRGDILDIFPPGYAKPVRLEFFGDAIEEMRLFDAESQRSLRPLDELTLLPVSPLALDKNGLAAARKRCDQLFSESRISENECYSFKKALDGGGAGILPGVLWDSPSLLEEWLPADSLWLLPGEADSAEALRDGRLALKEALEAEDAPLQQPAALALRKHSQPAPWRNFQCAFAEPLVMGVEERGTDFQERALHGFSDLFPLPAAQDRPWQHLAAGLKEWQGRRRQVILSFSSERGRNKFLKLAEQDGIIPALRYAPEGHGLFALVSPFRSGVELVWDNSLVLGEDIIYPRAEKTPRAASRAFKGLDNFDDLKKGDLLVHRDYGIGRFAGLHHLDLNSAANDFLLIEYSGRDKLYVPADRLGLIQRFKGTEGVEPALDRLGGPAWAAGKEKARKAIEKIAADLVEMYAYRKVAKGFRYDPPGELYHEFEATFGFEETPDQAKAIQDVLDDMDRGEPMDRLICGDVGFGKTEVALRAAFRAAAEGRQVALLCPTTVLAEQHYQTFRARLAGFPVNVGLLSRFVTRPRQKEVLKAAAAGQIDILIGTHRILSSDVKLPNLALLVLDEEQRFGVRHKEKLKALKKNVDVLTLTATPIPRTLQLSMSGIRELSIIETAPQDRKPVATAVLRRDDAVLGKVIEREIEREGQVFWVYNRVQGLERVAEYVRKLAPQARVGMAHGQMSETELETTMHKFWHGELDVLVCTSIVESGLDFPRANTLVVDQAQMFGLGQLYQLRGRVGRSDRQAYAFFVVPDAERLTAVAEERLRIIMDMDYLGAGFQVAMEDLRLRGAGNILGEVQSGHMSRVGLELYLEMLEEAVGRLKGTPSALAVETELTLGLPAHIPASYIDDGRERLRCYKALTSAVGGAAREEAALSMRDRFGPFPEELTNFLAVLDFKQFLTELQVQRADVHRDHLRMFWPDGQTAVQPERIVELAAEMPGARLHPPAGLTLPLSADLPFSEGLQKMRAALEEIRTAAS*