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L1_008_000M1_scaffold_3145

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3145_1
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..233)
DNA (231bp) protein (77aa)
primosomal protein n=1 Tax=Acinetobacter lwoffii RepID=UPI00026248F7
Helix-turn-helix domain protein {ECO:0000313|EMBL:EXR40950.1}; TaxID=1310756 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 1294243.;"
Pyocin large subunit
L1_008_000M1_scaffold_3145_2
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230..634)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UND5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49595.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_3145_3
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(619..1098)
DNA (480bp) protein (160aa)
Uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=E3IKB6_DESVR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS95613.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
L1_008_000M1_scaffold_3145_4
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1091..1309)
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNF8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49618.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_3145_5
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1306..3825)
DNA (2520bp) protein (840aa)
SNF2-related protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7TZS4_9DELT
SNF2-related protein {ECO:0000313|EMBL:EPR42686.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
DNA/RNA helicase
L1_008_000M1_scaffold_3145_6
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4192..4461)
DNA (270bp) protein (90aa)
30S ribosomal protein S20 n=2 Tax=Desulfovibrio RepID=D9YE25_9DELT
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
rpsT; 30S ribosomal protein S20
L1_008_000M1_scaffold_3145_7
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4722..6671)
DNA (1950bp) protein (650aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Glycine--tRNA ligase beta subunit n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YE26_9DELT
L1_008_000M1_scaffold_3145_8
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6675..7556)
DNA (882bp) protein (294aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Glycine--tRNA ligase alpha subunit n=2 Tax=Desulfovibrio RepID=D9YE27_9DELT
L1_008_000M1_scaffold_3145_9
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7739..8497)
DNA (759bp) protein (253aa)
DNA repair protein RecO n=2 Tax=Desulfovibrio RepID=D9YE28_9DELT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
DNA repair protein RecO
L1_008_000M1_scaffold_3145_10
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8497..9537)
DNA (1041bp) protein (347aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNC6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49586.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_3145_11
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9578..10516)
DNA (939bp) protein (313aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNC5_9DELT
SurA domain-containing protein
L1_008_000M1_scaffold_3145_12
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10726..11805)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YE31_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49584.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_3145_13
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11814..12173)
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNC3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49583.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_3145_14
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12201..15641)
DNA (3441bp) protein (1147aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Transcription-repair-coupling factor n=1 Tax=Desulfovibrio sp. 6_1_46AFAA RepID=G1UNC2_9DELT
transcription-repair coupling factor
L1_008_000M1_scaffold_3145_15
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16028..16393)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YE34_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49581.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
HesB/YadR/YfhF-family protein
L1_008_000M1_scaffold_3145_16
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16505..16714)
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=T5R8P4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49580.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
HesB/YadR/YfhF-family protein
L1_008_000M1_scaffold_3145_17
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16733..16828)
DNA (96bp) protein (32aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=T5R2P5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49579.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_3145_18
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16962..17504
DNA (543bp) protein (181aa)
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YE35_9DELT
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
L1_008_000M1_scaffold_3145_19
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17553..19100)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YE40_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49573.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_3145_20
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19605..20093
DNA (489bp) protein (163aa)
Transcription elongation factor GreA n=2 Tax=Desulfovibrio RepID=D9YE41_9DELT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
greA; transcription elongation factor GreA
L1_008_000M1_scaffold_3145_21
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20381..23353)
DNA (2973bp) protein (991aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YE42_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49571.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
family 2 glycosyl transferase
L1_008_000M1_scaffold_3145_22
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23440..24546
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YE43_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49570.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_3145_23
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24539..25465
DNA (927bp) protein (309aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=2 Tax=Desulfovibrio RepID=D9YE44_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW49569.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
Displaying 23 items

View Taxonomy