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L1_008_000M1_scaffold_8677

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_8677_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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121..1287
DNA (1167bp) protein (389aa)
Chaperone protein DnaJ n=3 Tax=Eubacterium RepID=D4JNQ4_9FIRM
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L1_008_000M1_scaffold_8677_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1360..2331
DNA (972bp) protein (324aa)
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Ribosomal protein L11 methyltransferase n=3 Tax=Eubacterium rectale RepID=PRMA_EUBR3
L1_008_000M1_scaffold_8677_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2343..2717
DNA (375bp) protein (125aa)
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E5D7_9FIRM
L1_008_000M1_scaffold_8677_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2695..2964
DNA (270bp) protein (90aa)
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Eubacterium rectale M104/1 RepID=D4JNQ2_9FIRM
L1_008_000M1_scaffold_8677_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3011..5296
DNA (2286bp) protein (762aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Probable tRNA sulfurtransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UV08_9FIRM
thiazole biosynthesis/tRNA modification protein ThiI
L1_008_000M1_scaffold_8677_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5370..5612)
DNA (243bp) protein (81aa)
PTS HPr component phosphorylation site n=4 Tax=Eubacterium RepID=D4JNP9_9FIRM
PTS HPr component phosphorylation site.
Uncharacterized protein {ECO:0000313|EMBL:ACR75643.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_8677_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5700..7004
DNA (1305bp) protein (435aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CBK90623.1}; EC=1.3.1.74 {ECO:0000313|EMBL:CBK90623.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
MiaB-like tRNA modifying enzyme n=2 Tax=Eubacterium RepID=D6E5D3_9FIRM
L1_008_000M1_scaffold_8677_8
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7065..7331
DNA (267bp) protein (89aa)
UPF0297 protein EUBREC_1896 n=4 Tax=Eubacterium RepID=C4ZAY5_EUBR3
hypothetical protein
UPF0297 protein BN626_01645 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_008_000M1_scaffold_8677_9
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7333..7764
DNA (432bp) protein (144aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Putative Holliday junction resolvase n=2 Tax=Eubacterium RepID=RUVX_EUBR3
hypothetical protein
L1_008_000M1_scaffold_8677_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7770..8033
DNA (264bp) protein (88aa)
Uncharacterized protein n=3 Tax=Eubacterium RepID=R6TMC1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75638.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_8677_11
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8073..8588
DNA (516bp) protein (172aa)
Predicted hydrolase of the metallo-beta-lactamase superfamily n=2 Tax=Eubacterium RepID=C4ZAY2_EUBR3
putative hydrolase of the metallo-beta-lactamase superfamily
Predicted hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:CDC74524.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_008_000M1_scaffold_8677_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8572..9591
DNA (1020bp) protein (340aa)
Predicted hydrolase of the metallo-beta-lactamase superfamily n=2 Tax=Eubacterium RepID=C4ZAY2_EUBR3
putative hydrolase of the metallo-beta-lactamase superfamily
Predicted hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:CDC74524.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_008_000M1_scaffold_8677_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9601..10011
DNA (411bp) protein (137aa)
Predicted periplasmic solute-binding protein n=4 Tax=Eubacterium RepID=D4JNP5_9FIRM
Predicted periplasmic solute-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75636.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L1_008_000M1_scaffold_8677_14
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10061..10702
DNA (642bp) protein (214aa)
O-methyltransferase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6U395_9FIRM
Predicted O-methyltransferase
O-methyltransferase {ECO:0000313|EMBL:CDC74526.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_008_000M1_scaffold_8677_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10753..11721
DNA (969bp) protein (323aa)
Collagenase and related proteases n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E5C8_9FIRM
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ACR75634.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Displaying 15 items

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