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L1_008_000M1_scaffold_7110

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_7110_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1003
DNA (1002bp) protein (334aa)
Type IV secretion system protein VirD4 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH98_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EEU96429.1}; Flags: Fragment;; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Type IV secretory pathway, VirD4 components
L1_008_000M1_scaffold_7110_2
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1135..1659
DNA (525bp) protein (175aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1T7_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS40384.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
L1_008_000M1_scaffold_7110_3
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1664..2428
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40385.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_008_000M1_scaffold_7110_4
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

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2409..3287
DNA (879bp) protein (293aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EIU9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA99840.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_7110_5
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3284..4507
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K233_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40388.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_008_000M1_scaffold_7110_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4765..5331
DNA (567bp) protein (189aa)
Uncharacterized protein (Fragment) n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZGC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07768.1}; Flags: Fragment;; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Type IV secretory pathway, VirB4 component
L1_008_000M1_scaffold_7110_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5489..5788
DNA (300bp) protein (100aa)
Site-specific DNA methylase (EC:2.1.1.37)
C-5 cytosine-specific DNA methylase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H9Y9_9FIRM
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EGJ45386.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Displaying 7 items

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