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L1_008_000M1_scaffold_10402

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_10402_1
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1302)
DNA (1302bp) protein (434aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
Signal transduction histidine kinase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R403_9CLOT
signal transduction histidine kinase
L1_008_000M1_scaffold_10402_2
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1348..2052)
DNA (705bp) protein (235aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXU4_CLOCD
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AEV68847.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_10402_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2154..2702)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 PF6_9FIRM">RepID=U2PPF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK45639.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_008_000M1_scaffold_10402_4
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2838..3797)
DNA (960bp) protein (320aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
Aspartokinase n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XI70_CALS8
L1_008_000M1_scaffold_10402_5
Kocuria rhizophila, Kocuria, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3779..3967)
DNA (189bp) protein (63aa)
ask; aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=378753 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Kocuria.;" source="Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 /; DC2201).;"
Aspartokinase n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GFE8_KOCRD
L1_008_000M1_scaffold_10402_6
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4024..4923)
DNA (900bp) protein (300aa)
homoserine kinase (EC:2.7.1.39)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
Homoserine kinase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A0M7_MAHA5
L1_008_000M1_scaffold_10402_7
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4923..6143)
DNA (1221bp) protein (407aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
Homoserine dehydrogenase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I1Y0_CLOCE
homoserine dehydrogenase
L1_008_000M1_scaffold_10402_8
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6264..7541)
DNA (1278bp) protein (426aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RP63_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC47114.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L1_008_000M1_scaffold_10402_9
unknown

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7979..8119
DNA (141bp) protein (47aa)

This feature has no annotations

L1_008_000M1_scaffold_10402_10
Selenomonas sp. FOBRC6, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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8290..8460
DNA (171bp) protein (57aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=936572 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. FOBRC6.;"
hisH; imidazole glycerol phosphate synthase (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Selenomonas sp. FOBRC6 RepID=J7TUJ4_9FIRM
Displaying 10 items

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