ggKbase home page

L1_008_000M1_scaffold_3639

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3639_1
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63..1178
DNA (1116bp) protein (372aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium sp. CAG:349 RepID=R6WG28_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
recF; recombination protein F
L1_008_000M1_scaffold_3639_2
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1207..1461
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LYP7_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV66765.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_3639_3
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1545..3581
DNA (2037bp) protein (679aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
DNA gyrase subunit B n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXL1_9CLOT
L1_008_000M1_scaffold_3639_4
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3619..4242
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HRI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO18025.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
hypothetical protein
L1_008_000M1_scaffold_3639_5
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4387..4554
DNA (168bp) protein (56aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JL19_CELLD
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein {ECO:0000313|EMBL:ADZ84560.1}; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Cellulosilyticum.;" source="Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB; 11756 / RHM5) (Clostridium lentocellum).;"
L1_008_000M1_scaffold_3639_6
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4577..5362
DNA (786bp) protein (262aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Clostridium pasteurianum BC1 RepID=R4KAJ1_CLOPA
16S rRNA (guanine(527)-N(7))-methyltransferase GidB
L1_008_000M1_scaffold_3639_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5930..9841
DNA (3912bp) protein (1304aa)
CUB domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PT25_9FIRM
CUB domain protein {ECO:0000313|EMBL:EKY18843.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Ig-like domain-containing surface protein
Displaying 7 items

View Taxonomy