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L1_008_000M1_scaffold_1804

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1804_1
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(2..2347)
DNA (2346bp) protein (782aa)
S-layer domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MIN5_9FIRM
S-layer domain protein {ECO:0000313|EMBL:CDB94131.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
S-layer domain-containing protein
L1_008_000M1_scaffold_1804_2
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2540..3787)
DNA (1248bp) protein (416aa)
Peptidase U32 n=7 Tax=Clostridium thermocellum RepID=A3DE63_CLOTH
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:ABN52242.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_1804_3
Bacillus smithii, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3885..5315)
DNA (1431bp) protein (477aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Putative uncharacterized protein n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QJ53_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EHL78785.1}; TaxID=665952 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus smithii 7_3_47FAA.;"
L1_008_000M1_scaffold_1804_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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5818..6498
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F451_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03726.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
two-component response regulator
L1_008_000M1_scaffold_1804_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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6516..8021
DNA (1506bp) protein (502aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Sensor histidine kinase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EUV8_9FIRM
histidine kinase
L1_008_000M1_scaffold_1804_6
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8495..9922)
DNA (1428bp) protein (476aa)
Amino acid carrier protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7GTW1_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CDE30814.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
hypothetical protein
L1_008_000M1_scaffold_1804_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10724..12100
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PM52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC10842.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L1_008_000M1_scaffold_1804_8
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12097..13440
DNA (1344bp) protein (448aa)
Orn/Lys/Arg decarboxylase major domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NR24_9CLOT
Orn/Lys/Arg decarboxylase major domain protein {ECO:0000313|EMBL:CDC10844.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
putative pyridoxal phosphate-dependent transferase
L1_008_000M1_scaffold_1804_9
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13504..14091)
DNA (588bp) protein (196aa)
TOPRIM domain-containing protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U3K4_ETHHY
TOPRIM domain-containing protein
TOPRIM domain-containing protein {ECO:0000313|EMBL:ADU27604.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L1_008_000M1_scaffold_1804_10
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14191..15606
DNA (1416bp) protein (472aa)
Putative stage V sporulation protein B n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECI1_9CLOT
Putative stage V sporulation protein B {ECO:0000313|EMBL:EEG30796.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
polysaccharide biosynthesis protein
L1_008_000M1_scaffold_1804_11
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15734..17098
DNA (1365bp) protein (455aa)
Citrate synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNV0_9CLOT
citrate synthase
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:CDM67588.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L1_008_000M1_scaffold_1804_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17123..18445
DNA (1323bp) protein (441aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Clostridium botulinum D str. 1873 RepID=C5VQ89_CLOBO
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=592027 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum D str. 1873.;"
RnfABCDGE type electron transport complex subunit C
L1_008_000M1_scaffold_1804_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18487..19023
DNA (537bp) protein (179aa)
Electron transport complex, rnfabcdge type, D subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W233_9CLOT
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
RnfABCDGE type electron transport complex subunit D
Displaying 13 items

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