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L1_008_000M1_scaffold_2963

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2963_1
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..619
DNA (618bp) protein (206aa)
Ferredoxin n=1 Tax=Clostridium tetani 12124569 RepID=U6EY03_CLOTA
rnfB; ferredoxin
Ferredoxin {ECO:0000313|EMBL:CDI49095.1}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
L1_008_000M1_scaffold_2963_2
unknown

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comp(1023..1523)
DNA (501bp) protein (167aa)

This feature has no annotations

L1_008_000M1_scaffold_2963_3
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1550..2311)
DNA (762bp) protein (254aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Ribosomal RNA small subunit methyltransferase E n=7 Tax=Clostridium thermocellum RepID=A3DF22_CLOTH
hypothetical protein
L1_008_000M1_scaffold_2963_4
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(2340..3299)
DNA (960bp) protein (320aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NBG2_9FIRM
L1_008_000M1_scaffold_2963_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(3374..4507)
DNA (1134bp) protein (378aa)
Chaperone protein DnaJ n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M878_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
chaperone protein DnaJ
L1_008_000M1_scaffold_2963_6
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4575..6440)
DNA (1866bp) protein (622aa)
Chaperone protein DnaK n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSB9_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
chaperone protein DnaK
L1_008_000M1_scaffold_2963_7
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6485..7078)
DNA (594bp) protein (198aa)
Protein GrpE n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B8L1_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
molecular chaperone GrpE (heat shock protein)
L1_008_000M1_scaffold_2963_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7131..8207)
DNA (1077bp) protein (359aa)
Heat-inducible transcription repressor hrcA n=4 Tax=Clostridium butyricum RepID=B1QX16_CLOBU
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
heat shock gene repressor HrcA
L1_008_000M1_scaffold_2963_9
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8464..9393
DNA (930bp) protein (310aa)
Stage III sporulation protein AA n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P5V0_9FIRM
Stage III sporulation protein AA {ECO:0000313|EMBL:CCZ05091.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:603.;"
stage III sporulation protein AA
L1_008_000M1_scaffold_2963_10
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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9390..9914
DNA (525bp) protein (175aa)
Stage III sporulation protein AB n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YB62_ANEAE
Stage III sporulation protein AB {ECO:0000313|EMBL:ERI08046.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
stage III sporulation protein AB
L1_008_000M1_scaffold_2963_11
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9999..10196
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EFZ5_9CLOT
Stage III sporulation protein AC {ECO:0000313|EMBL:EEG29606.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
stage III sporulation protein AC
L1_008_000M1_scaffold_2963_12
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10198..10587
DNA (390bp) protein (130aa)
Stage III sporulation protein AD n=1 Tax=Clostridium sp. CAG:452 RepID=R6XYI1_9CLOT
Stage III sporulation protein AD {ECO:0000313|EMBL:CDD26660.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
stage III sporulation protein AD
L1_008_000M1_scaffold_2963_13
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10623..11825
DNA (1203bp) protein (401aa)
Stage III sporulation protein AE n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TAM4_9CLOT
stage III sporulation protein AE
Stage III sporulation protein AE {ECO:0000313|EMBL:EGD48567.1}; Flags: Precursor;; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L1_008_000M1_scaffold_2963_14
unknown

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11832..11990
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 14 items

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