ggKbase home page

L1_008_000M1_scaffold_4522

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_4522_1
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1166)
DNA (1164bp) protein (388aa)
ABC transporter related protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XLY9_CALS8
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ABP67924.1}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
L1_008_000M1_scaffold_4522_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

1425..2567
DNA (1143bp) protein (381aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MLI8_9FIRM
L1_008_000M1_scaffold_4522_3
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

2590..3474
DNA (885bp) protein (295aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NGG9_9FIRM
L1_008_000M1_scaffold_4522_4
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3504..4349
DNA (846bp) protein (282aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ER46_9FIRM
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CDE03962.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
xylose isomerase domain-containing protein TIM barrel
L1_008_000M1_scaffold_4522_5
Bacillus sp. OxB-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(4621..4989)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Ureibacillus thermosphaericus RepID=UPI0002DC2238
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=98228 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. (strain OxB-1).;"
L1_008_000M1_scaffold_4522_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5053..5649)
DNA (597bp) protein (199aa)
50S ribosomal protein L10 n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B70CE1
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
rplJ; 50S ribosomal protein L10
L1_008_000M1_scaffold_4522_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists


comp(5851..6543)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MG69_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
rplA; 50S ribosomal protein L1
L1_008_000M1_scaffold_4522_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists


comp(6616..7041)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6M5T2_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
50S ribosomal protein L11
L1_008_000M1_scaffold_4522_9
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7204..7728)
DNA (525bp) protein (175aa)
Transcription termination/antitermination protein NusG n=2 Tax=Clostridium RepID=D8GJ53_CLOLD
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L1_008_000M1_scaffold_4522_10
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7760..7969)
DNA (210bp) protein (70aa)
Protein translocase subunit SecE n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBD9_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
secE; SecE
Displaying 10 items

View Taxonomy