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L1_008_000M1_scaffold_4632

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_4632_1
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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2..673
DNA (672bp) protein (224aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Alanine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MXB8_9FIRM
alanyl-tRNA synthetase
L1_008_000M1_scaffold_4632_2
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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687..1559
DNA (873bp) protein (291aa)
Polysaccharide deacetylase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TUH3_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CDC75850.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_4632_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1578..1922
DNA (345bp) protein (115aa)
Histidine triad nucleotide-binding protein 2 n=4 Tax=Clostridium butyricum RepID=B1QX05_CLOBU
histidine triad (HIT) family protein
Histidine triad nucleotide-binding protein 2 {ECO:0000313|EMBL:ETI89049.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L1_008_000M1_scaffold_4632_4
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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2360..3019
DNA (660bp) protein (220aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DXZ9_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDA92460.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
Transcriptional regulator
L1_008_000M1_scaffold_4632_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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2961..3263
DNA (303bp) protein (101aa)
pepO; endopeptidase O (EC:3.4.24.-)
Endopeptidase O n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NS57_9FIRM
Endopeptidase O {ECO:0000313|EMBL:CDC00542.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_4632_6
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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3273..3959
DNA (687bp) protein (229aa)
Multimeric flavodoxin WrbA n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MXF0_9FIRM
Multimeric flavodoxin WrbA {ECO:0000313|EMBL:CDC00544.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
NADPH-dependent FMN reductase
L1_008_000M1_scaffold_4632_7
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4018..4356
DNA (339bp) protein (113aa)
Competence protein TfoX n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QZ05_9CLOT
Competence protein TfoX {ECO:0000313|EMBL:EPR10189.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
competence-specific genes regulator
L1_008_000M1_scaffold_4632_8
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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4372..5454
DNA (1083bp) protein (361aa)
membrane protein n=1 Tax=Lachnospiraceae bacterium NK4A136 RepID=UPI0003B6BE65
Acyltransferase family.
Acyltransferase family {ECO:0000313|EMBL:CBK73688.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_4632_9
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5643..6551
DNA (909bp) protein (303aa)
Putative permease, DMT superfamily n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F7U3_DESDL
permease, DMT superfamily
Putative permease, DMT superfamily {ECO:0000313|EMBL:AGA69090.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L1_008_000M1_scaffold_4632_10
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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6923..7504
DNA (582bp) protein (194aa)
Putative manganese efflux pump MntP n=1 Tax=Dorea sp. CAG:105 RepID=R5DIB9_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
Predicted membrane protein
L1_008_000M1_scaffold_4632_11
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7539..7961
DNA (423bp) protein (141aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.41 4.1.1.3)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Eubacterium sp. CAG:841 RepID=R7G001_9FIRM
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDE20113.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L1_008_000M1_scaffold_4632_12
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7928..8545
DNA (618bp) protein (206aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.41 4.1.1.3)
Sodium ion-translocating decarboxylase, beta subunit {ECO:0000313|EMBL:CBL17525.1}; EC=4.1.1.3 {ECO:0000313|EMBL:CBL17525.1};; EC=4.1.1.41 {ECO:0000313|EMBL:CBL17525.1};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Eubacterium sp. CAG:841 RepID=R7G001_9FIRM
L1_008_000M1_scaffold_4632_13
unknown

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8591..8740
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 13 items

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