ggKbase home page

L1_008_000M1_scaffold_9437

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_9437_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..650
DNA (648bp) protein (216aa)
Site-specific recombinase n=2 Tax=Clostridiales RepID=G2T0J6_ROSHA
site-specific recombinase
Site-specific recombinase {ECO:0000313|EMBL:AEN95528.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_9437_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists


comp(851..1243)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RTH0_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
SSU ribosomal protein S9P
L1_008_000M1_scaffold_9437_3
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1264..1695)
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=1 Tax=Clostridium sp. CAG:964 RepID=R6U4S7_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
LSU ribosomal protein L13P
L1_008_000M1_scaffold_9437_4
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1941..2975)
DNA (1035bp) protein (345aa)
RIP metalloprotease RseP n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F1B8_CLOS4
RIP metalloprotease RseP {ECO:0000313|EMBL:ERI99061.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
membrane-associated zinc metalloprotease
L1_008_000M1_scaffold_9437_5
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3021..4151)
DNA (1131bp) protein (377aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium sp. CAG:277 RepID=R7JX71_9CLOT
Displaying 5 items

View Taxonomy