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L1_008_000M1_scaffold_3147_9

Organism: dasL1_008_000M1_maxbin2_maxbin_110_fasta_sub_fa

partial RP 28 / 55 MC: 2 BSCG 32 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(7109..10648)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 1166.0
  • Bit_score: 1049
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MMT9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 1166.0
  • Bit_score: 1049
  • Evalue 0.0
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 47.4
  • Coverage: 1157.0
  • Bit_score: 1043
  • Evalue 0.0

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Taxonomy

Firmicutes bacterium CAG:41 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3540
ATGAGTGTATTTTTGAATATTATGGAAGAGCTTGCCGAGTTTTCGGAGCTGTCCGAGAGTATAAAATCAAATATAAGCCCAATCAGCGTGTCGGGTGTGTCGGAATCCGTTATGGCACACCTTGTTTTTTCTGTATGCGAAAAGTTAAAAAGCGGCGGATTGGTGATTGCACGTTCCGACAGCGAGGCGCAAAAGCTGTACAAAGATTTGTGTGCTTTTGCCGACCGCGACAGGGTTTTGTTTTATAACAAGACCGAGCTTACCTTGTATGACACCGAGGCAAAAAGCCGCGATACATCAACGCTCAGACTTTCGGTGCTGAACAGGTTTGTACAGTCGGAAAAGGAAAATAAAAACGATTTAATCATCGTGACATCGCCCGATGCTCTGTTGAGCGTAACTTTTCCGCGCGACAGATGGGATAAGGCCTGTTTCCATCTTGATGAGGGTGATGAAATCGAGCTTGACGAGCTGGCGAAACGGCTCGTCAAGCTCGGTTATACGAGAGAAGATACGGTCGAGGGCGTCGGACAGTTCAGCATAAGAGGCGGTATTGCCGATGTTTTTCCGTGCGGCTGTGAAAATCCTCTGCGTATCGAATTTTTTGACAATGAGGTTGACTCGATTCGTATATTCGATGCCGAAAGCCAGCGCACAATTGAACGTGCGGACGGGTTTGACGCCGTTCCGTCAAAAGAGCTTGTCTTGGATGACGCCGAGACGGCGGCGCTGATAGCTAAGCTGAAAGAAATACGTAAAAATCTCGATACCTCGATTGAGCGGCAAAGCCGATGCTCTGCCGCGCTTTCGCGCGATATTGAGCGGCTCGAACAGAATAAAAGCTTTCCGTCCCTTGATATGTATATTCCGTATATATATCCGAACCGAAAACCAACGCTGATTGATTATATTCCGAACGGTTTTATTGTGTTTGCGGATGAAACCGAAAGGATTTTTGAACGTCTTGATGTGATTGAACGCGAACGTTCGGAGACGATTATATCAATGTATGAGTCGGGTAACGCTCCGCAGCCTTGCGGAGAGTACACCGAGAACAAAACAGCCGCACTTAAAGAACTGTTGATGCGGCGTTTTGTCGAGCTCAGTGCGCTTTCGCATTACGGAAACGAGGTAAAGCCCAAGCGAAGCTATAACATAGAATCGAGAACCTTGACGGGATTTAACGGAAATGCAGAGTTTTTTAAAGATACCCTTAAATATTATAAGGATAATAAGTATCGGACGATAATCTTGGCAGGAACGCCCGAGCGTGCAAAAAATATGCAGCTCAGGCTTGAGGATGACGGAATTGTTTCGTCGTATCAGAGTGTGCCGACCGCATTGCCCGAGAGGGGCGGAATTGTCATTTGCGGCGGCTCGATAAGCCGCGGCTTTGAATATCCGCTCATCCGCACGGCGATAATAGGCGACAGAGAAGTATTCGGAAGTGAGCGAAAACGCCGCAAAAAGCCGCTGTACCGGGGTAAAAAAGGCGATAAAATTTCTGATTTTACCGTATTGAATCCGGGGGATTATGTTGTCCACCGAAACCACGGAATAGGCAGGTTTGACGGCATTGAACAATTGAGCGTTGACGGCGTGCGCAAGGATTATTTAAAGATTATATATAAAGACGGCGGAAGTCTTTATGTCCCGACCGACCAGCTCGATATGGTCTATAGGTATGACAAATCGGACGGAGCAAGGGTCAGACTTAACACCCTCGGCGGAGCTGATTGGGCAAAGACGAAACAGCGTGTCAAGGCTGCGGCGGCGGATATGGCGAAAAAGCTGATTGAGCTTTATGCCAAGCGTGCCAATATGCCCGGTATCGCGTTTGCGCCCGACACCGAGTGGCAGCACGGTTTTGAGGCGGCGTGTCCGTATGATGAAACGGATGACCAGCTGCGCAGCATCGATGAGGTTAAGGCTGATATGGAAAAGCCGCACCCGATGGACAGGTTGCTGTGCGGAGATGTCGGGTACGGGAAGACCGAGGTTGCTCTGCGTGCCGCATTTAAGGCGGTAATGAGCGGTTATCAGGTCGCGTATCTCGTTCCGACAACCATACTTGCCAACCAGCACTATAACACGTTTAAACAGAGAATGATGGAATACCCCGCCGAAATCCGAATGCTTTCGAGATTTTGTACGGCGGCGGAGCAAAAAGAGGTGTTTAAAAAGCTGGCGACCGGTGAGGTCGATATTGTTATTGGTACGCATAAGCTGTTTAACAAAGAATTAAAGTTTAAAAAACTCGGGTTGCTTATAATCGATGAGGAACAGCGTTTCGGCGTTGCACACAAGGAAAAAATCAAAGCCCTGAAAGGTGATGTTGATGTCCTCACTCTTTCGGCAACACCGATTCCGCGAACTCTGCATATGTCGCTCAGCGGCATTCGGGATATGAGCATAATAAATCAACCGCCGGGCGAACGTCATCCCGTTGAAACTTATGTTATGGAATACGAACCGAATGTGATAAGAGAGGCGATGGAGCGCGAGCTTTCGAGAGGCGGACAGGTCTATTATCTCTATAACCGTGTTGACGGAATATATAAAGCGGCAAACCGTATAGCCGAGATGCTGCCGCAGGCGCACGTTGCGGTCGCTCACGGAAAGATGAGCGAGAACGAGCTTGAATCCGTTATGATGGATGTATCTGACGGAGAGGTAGATATTCTTGTTTGCACAACCATTATCGAAACGGGTTTGGATATTGCAAACGTGAACACCATTATAATAGAAAACGCAGACAGGCTCGGGCTTGCGCAAATGTATCAGCTCAGAGGAAGAGTGGGGCGCAGCAATCGGCTTGCTTATGCGTATCTCACGTTCAGGCGCAATAAACAGCTTAGCGAGGAATCGGAAAAGCGTTTGCTTGCAATGAAAGAATTTACCGAATTCGGTTCGGGATTTAAGATTGCGATGCGCGACCTTGAAATTCGCGGAACGGGCAACCTGATAGGTGCGGAACAGCACGGACATATGGAAAGCGTAGGTTATGAAATGTATTGCCGCCTTTTGGAAGAGGCGGTAAGCGAACAAAAAGGTTCGTATATCAAAACGGCGGAAACATCAATTGACCTGCCCGTTTCGGCGTATATTGGCGACAGCTATATAACCGACCACAGCCGCCGAATAGGTGCGTATAAGAGAATCGCGTCAATCACCGACCGTGGTGGTTGGTTTGACGTTTATGATGAGATAGAGGACAGATTCGGAACGGTTCCTCAATCGGTTTCGAATTTGATGGAAATAGCTTTGATTAAAAACTATGCGTCAAAATTCGGCATATCCGATATAACGGGCAGAGCCGATGAAATTCTTATGAAGTTTGACGGCGAGTGTACGCCCGATTTACAAAATGCGATAACGCTTATGAACGAGATGCCCAAAAAACTGTTTTTGACAAATCCGTCAAACCCGACGCTGCATTATAAAATAAAACGACCCGCGCCCAACGGCGAAACCAAGTATTTAAAAGAAATATGTGATATTACGGCGAAAATCTGCGGTGCGGATGACGGGAATATATGA
PROTEIN sequence
Length: 1180
MSVFLNIMEELAEFSELSESIKSNISPISVSGVSESVMAHLVFSVCEKLKSGGLVIARSDSEAQKLYKDLCAFADRDRVLFYNKTELTLYDTEAKSRDTSTLRLSVLNRFVQSEKENKNDLIIVTSPDALLSVTFPRDRWDKACFHLDEGDEIELDELAKRLVKLGYTREDTVEGVGQFSIRGGIADVFPCGCENPLRIEFFDNEVDSIRIFDAESQRTIERADGFDAVPSKELVLDDAETAALIAKLKEIRKNLDTSIERQSRCSAALSRDIERLEQNKSFPSLDMYIPYIYPNRKPTLIDYIPNGFIVFADETERIFERLDVIERERSETIISMYESGNAPQPCGEYTENKTAALKELLMRRFVELSALSHYGNEVKPKRSYNIESRTLTGFNGNAEFFKDTLKYYKDNKYRTIILAGTPERAKNMQLRLEDDGIVSSYQSVPTALPERGGIVICGGSISRGFEYPLIRTAIIGDREVFGSERKRRKKPLYRGKKGDKISDFTVLNPGDYVVHRNHGIGRFDGIEQLSVDGVRKDYLKIIYKDGGSLYVPTDQLDMVYRYDKSDGARVRLNTLGGADWAKTKQRVKAAAADMAKKLIELYAKRANMPGIAFAPDTEWQHGFEAACPYDETDDQLRSIDEVKADMEKPHPMDRLLCGDVGYGKTEVALRAAFKAVMSGYQVAYLVPTTILANQHYNTFKQRMMEYPAEIRMLSRFCTAAEQKEVFKKLATGEVDIVIGTHKLFNKELKFKKLGLLIIDEEQRFGVAHKEKIKALKGDVDVLTLSATPIPRTLHMSLSGIRDMSIINQPPGERHPVETYVMEYEPNVIREAMERELSRGGQVYYLYNRVDGIYKAANRIAEMLPQAHVAVAHGKMSENELESVMMDVSDGEVDILVCTTIIETGLDIANVNTIIIENADRLGLAQMYQLRGRVGRSNRLAYAYLTFRRNKQLSEESEKRLLAMKEFTEFGSGFKIAMRDLEIRGTGNLIGAEQHGHMESVGYEMYCRLLEEAVSEQKGSYIKTAETSIDLPVSAYIGDSYITDHSRRIGAYKRIASITDRGGWFDVYDEIEDRFGTVPQSVSNLMEIALIKNYASKFGISDITGRADEILMKFDGECTPDLQNAITLMNEMPKKLFLTNPSNPTLHYKIKRPAPNGETKYLKEICDITAKICGADDGNI*