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L1_008_000M1_scaffold_3129

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3129_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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95..949
DNA (855bp) protein (285aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLY4_9FIRM
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:CDD34870.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_3129_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1308..3248)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34871.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_3129_3
unknown

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3463..4566
DNA (1104bp) protein (368aa)

This feature has no annotations

L1_008_000M1_scaffold_3129_4
unknown

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4568..5824
DNA (1257bp) protein (419aa)

This feature has no annotations

L1_008_000M1_scaffold_3129_5
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5861..6541
DNA (681bp) protein (227aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VI28_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO56887.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ABC transporter-like protein
L1_008_000M1_scaffold_3129_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6634..7965
DNA (1332bp) protein (444aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWJ9_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:CDD34872.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
methyl-accepting chemotaxis sensory transducer
L1_008_000M1_scaffold_3129_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8170..8316
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34873.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_3129_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8333..9739
DNA (1407bp) protein (469aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTY7_9FIRM
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:CDD34874.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_3129_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9851..10159
DNA (309bp) protein (103aa)
Anti-sigma factor antagonist n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLY9_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
anti-sigma-factor antagonist
L1_008_000M1_scaffold_3129_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10182..10622
DNA (441bp) protein (147aa)
anti-sigma regulatory factor, serine/threonine protein kinase (EC:2.7.11.1)
Anti-sigma regulatory factor serine/threonine protein kinase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1S8_9FIRM
Anti-sigma regulatory factor serine/threonine protein kinase {ECO:0000313|EMBL:CDD34876.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_3129_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10648..11373
DNA (726bp) protein (242aa)
RNA polymerase sigma factor n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWK5_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
FliA/WhiG family RNA polymerase sigma factor
Displaying 11 items

View Taxonomy