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L1_008_000M1_scaffold_1167

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1167_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(87..773)
DNA (687bp) protein (229aa)
Putative SanA protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3V7_9FIRM
Putative SanA protein {ECO:0000313|EMBL:CDD35531.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
uncharacterized membrane protein
L1_008_000M1_scaffold_1167_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(801..2171)
DNA (1371bp) protein (457aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
pyridoxal-phosphate dependent TrpB-like enzyme (EC:4.2.1.20)
Tryptophan synthase beta chain 1 n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYI5_9FIRM
L1_008_000M1_scaffold_1167_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2197..2703)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35533.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1167_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2871..3500
DNA (630bp) protein (210aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Roseburia sp. CAG:309 RepID=R6YW08_9FIRM
L1_008_000M1_scaffold_1167_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3649..4542)
DNA (894bp) protein (298aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3W1_9FIRM
L1_008_000M1_scaffold_1167_6
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4555..5178)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CCL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75467.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
CDP-alcohol phosphatidyltransferase
L1_008_000M1_scaffold_1167_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5231..6271)
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35537.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1167_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6268..6978)
DNA (711bp) protein (237aa)
PAP2 superfamily n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHX0_9FIRM
PAP2 superfamily {ECO:0000313|EMBL:CDD35538.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
PAP2 superfamily.
L1_008_000M1_scaffold_1167_9
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7141..7998
DNA (858bp) protein (286aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Clostridium sp. CAG:167 RepID=R5W397_9CLOT
L1_008_000M1_scaffold_1167_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8097..8669)
DNA (573bp) protein (191aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3W3_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDD35541.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
cell wall hydrolase/autolysin
L1_008_000M1_scaffold_1167_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8772..9398
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35542.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
stage V sporulation protein AA
L1_008_000M1_scaffold_1167_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9385..9807
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35543.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1167_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9836..10336
DNA (501bp) protein (167aa)
Stage V sporulation protein AC n=1 Tax=Roseburia sp. CAG:309 RepID=R6YW17_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:CDD35544.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
stage V sporulation protein AC
L1_008_000M1_scaffold_1167_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10434..10793
DNA (360bp) protein (120aa)
Acyl-CoA hydrolase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNZ8_9FIRM
Acyl-CoA hydrolase {ECO:0000313|EMBL:CDD35545.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Acyl-CoA hydrolase
L1_008_000M1_scaffold_1167_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10809..11762
DNA (954bp) protein (318aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3W7_9FIRM
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:CDD35546.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ATPase
L1_008_000M1_scaffold_1167_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11765..12883
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35547.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1167_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12825..14018
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35548.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1167_18
unknown

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14026..15246
DNA (1221bp) protein (407aa)

This feature has no annotations

L1_008_000M1_scaffold_1167_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15363..15899
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YS55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34269.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1167_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15971..17236)
DNA (1266bp) protein (422aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YE53_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CDD34268.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1167_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17698..19626
DNA (1929bp) protein (643aa)
DNA topoisomerase (EC:5.99.1.3)
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZUS4_9FIRM
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000313|EMBL:CDD34267.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1167_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19645..21900
DNA (2256bp) protein (752aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA topoisomerase (EC:5.99.1.3)
DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z055_9FIRM
L1_008_000M1_scaffold_1167_23
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21857..22663
DNA (807bp) protein (269aa)
ThiF family protein n=2 Tax=Lachnospiraceae RepID=R6GEQ4_9FIRM
ThiF family protein {ECO:0000313|EMBL:CDB19736.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L1_008_000M1_scaffold_1167_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22756..23481
DNA (726bp) protein (242aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
CMP-sialic acid synthetase putative n=1 Tax=Roseburia sp. CAG:309 RepID=R6YS51_9FIRM
CMP-sialic acid synthetase putative {ECO:0000313|EMBL:CDD34264.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1167_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23541..26690
DNA (3150bp) protein (1050aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YE47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34263.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
dockerin type I cellulosome protein
L1_008_000M1_scaffold_1167_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26868..27065)
DNA (198bp) protein (66aa)
Cold-shock DNA-binding domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZUR9_9FIRM
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:CDD34262.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
cold-shock DNA-binding domain-containing protein
Displaying 26 items

View Taxonomy