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L1_008_000M1_scaffold_1342

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1342_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..550
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YSD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34349.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1342_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

668..2485
DNA (1818bp) protein (606aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Elongation factor 4 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWQ0_9FIRM
GTP-binding protein LepA
L1_008_000M1_scaffold_1342_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2487..3632
DNA (1146bp) protein (382aa)
putative oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIM7_9FIRM
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDD35798.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1342_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3724..4632
DNA (909bp) protein (303aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Purine nucleoside phosphorylase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZ64_9FIRM
hypothetical protein
L1_008_000M1_scaffold_1342_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4622..5911
DNA (1290bp) protein (430aa)
Amidohydrolase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z4H5_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDD35796.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
SsnA; cytosine deaminase
L1_008_000M1_scaffold_1342_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5915..6640
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35795.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1342_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6728..8911
DNA (2184bp) protein (728aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
carboxylesterase type B (EC:3.1.1.-)
Putative lipoprotein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWP6_9FIRM
L1_008_000M1_scaffold_1342_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8986..12504
DNA (3519bp) protein (1173aa)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIM2_9FIRM
Pyruvate-flavodoxin oxidoreductase {ECO:0000313|EMBL:CDD35793.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
L1_008_000M1_scaffold_1342_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12597..13988
DNA (1392bp) protein (464aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z4H1_9FIRM
L1_008_000M1_scaffold_1342_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13998..14999
DNA (1002bp) protein (334aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
aspartate--ammonia ligase, AsnA-type (EC:6.3.1.1)
Aspartate--ammonia ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPK5_9FIRM
L1_008_000M1_scaffold_1342_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15090..16271
DNA (1182bp) protein (394aa)
yugK; putative NADH-dependent butanol dehydrogenase 2 (EC:1.1.1.-)
NADH-dependent butanol dehydrogenase A n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWP2_9FIRM
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:CDD35789.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1342_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16294..17055
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35788.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1342_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17070..19106
DNA (2037bp) protein (679aa)
ATP-dependent DNA helicase RecG n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZ55_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CDD35787.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ATP-dependent DNA helicase RecG
L1_008_000M1_scaffold_1342_14
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19179..19742
DNA (564bp) protein (188aa)
Methyltransferase n=1 Tax=Clostridium sp. CAG:167 RepID=R5W7C1_9CLOT
Methyltransferase {ECO:0000313|EMBL:CCZ91676.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
methyltransferase
L1_008_000M1_scaffold_1342_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19762..20367
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35785.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1342_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20314..21189)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35784.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1342_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21276..22130
DNA (855bp) protein (285aa)
DegV family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIL0_9FIRM
DegV family protein {ECO:0000313|EMBL:CDD35783.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
degV family protein
L1_008_000M1_scaffold_1342_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22245..23435
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Acetate kinase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZ50_9FIRM
acetate kinase
L1_008_000M1_scaffold_1342_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23518..23700
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z4G0_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ribosomal protein L32
L1_008_000M1_scaffold_1342_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23784..24659
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35780.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
EDD domain protein, DegV family
L1_008_000M1_scaffold_1342_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24928..25203)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35779.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1342_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25344..27632)
DNA (2289bp) protein (763aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZ45_9FIRM
L1_008_000M1_scaffold_1342_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27837..28571
DNA (735bp) protein (245aa)
Histidinol phosphatase and related hydrolases of the PHP family n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z4F4_9FIRM
Histidinol phosphatase and related hydrolases of the PHP family {ECO:0000313|EMBL:CDD35776.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
phosphotransferase domain-containing protein
L1_008_000M1_scaffold_1342_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28606..29214)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35775.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1342_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29371..30762
DNA (1392bp) protein (464aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSX9_9FIRM
Multidrug transporter MatE {ECO:0000313|EMBL:KJF40314.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L1_008_000M1_scaffold_1342_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30749..32116
DNA (1368bp) protein (456aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Roseburia sp. CAG:309 RepID=R6YP66_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDD35630.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
TrmA family RNA methyltransferase
L1_008_000M1_scaffold_1342_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32420..32860
DNA (441bp) protein (147aa)
Acetyltransferase gnat family n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZX8_9FIRM
Acetyltransferase gnat family {ECO:0000313|EMBL:CDD36037.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1342_28
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32912..33592
DNA (681bp) protein (227aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U550_9CLOT
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:EKQ56047.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
HAD superfamily hydrolase
L1_008_000M1_scaffold_1342_29
Treponema sp. JC4, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

33647..34072
DNA (426bp) protein (142aa)
NUDIX hydrolase n=1 Tax=Lachnobacterium bovis RepID=UPI0003B46533
NTP pyrophosphohydrolase {ECO:0000313|EMBL:EID84739.1}; TaxID=1124982 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. JC4.;"
NUDIX hydrolase
L1_008_000M1_scaffold_1342_30
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34122..34658
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Bacillus cereus G9241 RepID=Q4MLB1_BACCE
Uncharacterized protein {ECO:0000313|EMBL:AJI05573.1}; TaxID=269801 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus G9241.;"
hypothetical protein
Displaying items 1-30 of 32 in total

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