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L1_008_000M1_scaffold_1389

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1389_1
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1357..1566
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K225_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40378.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L1_008_000M1_scaffold_1389_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1733..3382)
DNA (1650bp) protein (550aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseburia sp. CAG:309 RepID=R7A0L5_9FIRM
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:CDD36297.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3748..5127)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36296.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
MATE efflux family protein
L1_008_000M1_scaffold_1389_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5450..6055
DNA (606bp) protein (202aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Roseburia sp. CAG:309 RepID=R6YQY5_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CDD36295.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_008_000M1_scaffold_1389_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6040..7824
DNA (1785bp) protein (595aa)
DNA mismatch repair protein MutS n=1 Tax=Roseburia sp. CAG:309 RepID=R6YY62_9FIRM
DNA mismatch repair protein MutS {ECO:0000313|EMBL:CDD36294.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA mismatch repair protein
L1_008_000M1_scaffold_1389_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7782..8015)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R7A0L2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36292.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8707..9666
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36291.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1389_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9638..10855
DNA (1218bp) protein (406aa)
Type II secretion system protein E n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7Y6_9CLOT
Type II secretion system protein E {ECO:0000313|EMBL:CDD73443.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
type II secretion system protein E
L1_008_000M1_scaffold_1389_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10852..11595
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YY19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36239.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Flp pilus assembly protein TadB
L1_008_000M1_scaffold_1389_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11611..12975
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36238.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13007..13180
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R7A0F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36237.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13177..15129
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36236.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15265..16044
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YQT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36235.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16053..16490
DNA (438bp) protein (146aa)
Prepilin peptidase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YY14_9FIRM
Prepilin peptidase {ECO:0000313|EMBL:CDD36234.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
prepilin peptidase
L1_008_000M1_scaffold_1389_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16514..16867
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36233.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1389_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16875..18098
DNA (1224bp) protein (408aa)
FHA domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R7A0F0_9FIRM
FHA domain protein {ECO:0000313|EMBL:CDD36232.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1389_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17989..19410)
DNA (1422bp) protein (474aa)
Iron-sulfur cluster binding protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5R8_9FIRM
Iron-sulfur cluster binding protein {ECO:0000313|EMBL:CDD36231.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19526..20161
DNA (636bp) protein (212aa)
Putative small hydrophobic molecule transporter protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YQT2_9FIRM
Putative small hydrophobic molecule transporter protein {ECO:0000313|EMBL:CDD36230.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Uncharacterized membrane protein (homolog of Drosophila rhomboid)
L1_008_000M1_scaffold_1389_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20161..21153
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YY10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36229.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21219..21626
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36228.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
L1_008_000M1_scaffold_1389_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21645..22715
DNA (1071bp) protein (357aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Roseburia sp. CAG:309 RepID=R7A0E5_9FIRM
L1_008_000M1_scaffold_1389_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23043..23714
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5R3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36226.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1389_23
unknown

Not on your lists

comp(23762..24001)
DNA (240bp) protein (80aa)

This feature has no annotations

Displaying 23 items

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