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L1_008_000M1_scaffold_1403

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1403_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(135..866)
DNA (732bp) protein (244aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Roseburia sp. CAG:309 RepID=R6YW56_9FIRM
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CDD35594.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1403_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1061..2167
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YP38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35595.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Transcriptional regulator
L1_008_000M1_scaffold_1403_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2200..2982
DNA (783bp) protein (261aa)
Teichoic acid biosynthesis proteins (EC:2.4.1.187)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z401_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35596.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1403_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2963..3835
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35597.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1403_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3966..5078
DNA (1113bp) protein (371aa)
ABC transporter related n=1 Tax=Roseburia sp. CAG:309 RepID=R6YI10_9FIRM
ABC transporter related {ECO:0000313|EMBL:CDD35598.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC transporter
L1_008_000M1_scaffold_1403_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5216..6304
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YW60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35599.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
transcriptional regulator CdaR
L1_008_000M1_scaffold_1403_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6349..7059
DNA (711bp) protein (237aa)
Cell division ATP-binding protein FtsE n=1 Tax=Roseburia sp. CAG:309 RepID=R6YP41_9FIRM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:CDD35600.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
cell division ATP-binding protein FtsE
L1_008_000M1_scaffold_1403_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7046..7957
DNA (912bp) protein (304aa)
Cell division protein FtsX n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z406_9FIRM
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
cell division protein FtsX
L1_008_000M1_scaffold_1403_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7973..9265
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35602.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
peptidase M23B
L1_008_000M1_scaffold_1403_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9344..10543
DNA (1200bp) protein (400aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Putative phage prohead protease HK97 family n=1 Tax=Roseburia sp. CAG:309 RepID=R6YI15_9FIRM
Putative phage prohead protease HK97 family {ECO:0000313|EMBL:CDD35603.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1403_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10558..11100
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YW64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35604.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1403_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11118..13487
DNA (2370bp) protein (790aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Endoglucanase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YP45_9FIRM
Endoglucanase
L1_008_000M1_scaffold_1403_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13501..14181
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z409_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35606.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
transcriptional regulator
L1_008_000M1_scaffold_1403_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14171..15163
DNA (993bp) protein (331aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYP8_9FIRM
integral membrane sensor signal transduction histidine kinase
L1_008_000M1_scaffold_1403_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15244..15948
DNA (705bp) protein (235aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YI20_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD35608.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_1403_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15932..16912
DNA (981bp) protein (327aa)
ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YW69_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDD35609.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC transporter permease
L1_008_000M1_scaffold_1403_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16857..18464
DNA (1608bp) protein (536aa)
ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YW69_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDD35609.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC transporter permease
L1_008_000M1_scaffold_1403_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18526..18984)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YP50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35610.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1403_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19160..19798
DNA (639bp) protein (213aa)
Entner-Doudoroff aldolase (EC:4.1.2.14 4.1.3.16)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z413_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:CDD35611.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_1403_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19827..20948
DNA (1122bp) protein (374aa)
Ser/Thr phosphatase family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYQ3_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDD35612.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
putative metallophosphoesterase
L1_008_000M1_scaffold_1403_21
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20963..21373
DNA (411bp) protein (137aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
Glycerol kinase n=1 Tax=Clostridium sp. CAG:253 RepID=R6LYK8_9CLOT
glycerol kinase
L1_008_000M1_scaffold_1403_22
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21736..22128
DNA (393bp) protein (131aa)
Predicted membrane protein (DUF2127) n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4J3G0_BUTFI
Predicted membrane protein (DUF2127).
Predicted membrane protein (DUF2127) {ECO:0000313|EMBL:CBK74649.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_1403_23
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22155..22829
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38633.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Predicted phosphatases
L1_008_000M1_scaffold_1403_24
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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22906..23442
DNA (537bp) protein (179aa)
GCN5-related N-acetyltransferase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTH7_ALKMQ
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABR49495.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
Displaying 24 items

View Taxonomy