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L1_008_000M1_scaffold_1445

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1445_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1039
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YS55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34269.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1445_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1155..2801
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YE07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34218.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1445_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2817..3161
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZUM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34217.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
type IV pilus assembly PilZ
L1_008_000M1_scaffold_1445_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3290..6073
DNA (2784bp) protein (928aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
xyn10E; endo-1,4-beta-xylanase (EC:3.2.1.8)
Endoxylanase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9D0_9CLOT
L1_008_000M1_scaffold_1445_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6309..7271
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74131.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_1445_6
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7291..8682
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5E7H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX87199.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
L1_008_000M1_scaffold_1445_7
unknown

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8941..9366
DNA (426bp) protein (142aa)

This feature has no annotations

L1_008_000M1_scaffold_1445_8
unknown

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9387..10007
DNA (621bp) protein (207aa)

This feature has no annotations

L1_008_000M1_scaffold_1445_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10276..11247
DNA (972bp) protein (324aa)
Putative transposase YhgA-like n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5I9_9CLOT
Putative transposase YhgA-like {ECO:0000313|EMBL:CDD73399.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Putative transposase, YhgA-like.
L1_008_000M1_scaffold_1445_10
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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11355..12233
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GQI3_SELRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL83020.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L1_008_000M1_scaffold_1445_11
unknown

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12251..13345
DNA (1095bp) protein (365aa)

This feature has no annotations

L1_008_000M1_scaffold_1445_12
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13368..14348
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V1Y7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92178.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Sel1 domain-containing protein
L1_008_000M1_scaffold_1445_13
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14361..15674
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69522.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
L1_008_000M1_scaffold_1445_14
unknown

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15641..16033
DNA (393bp) protein (131aa)

This feature has no annotations

L1_008_000M1_scaffold_1445_15
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16048..17778
DNA (1731bp) protein (577aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69522.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L1_008_000M1_scaffold_1445_16
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17796..18524
DNA (729bp) protein (243aa)
von Willebrand factor type A n=1 Tax=Roseburia sp. CAG:380 RepID=R6V574_9FIRM
von Willebrand factor type A {ECO:0000313|EMBL:CDC92165.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain
L1_008_000M1_scaffold_1445_17
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18552..20357
DNA (1806bp) protein (602aa)
Uncharacterized protein n=3 Tax=root RepID=A5Z6S0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM51496.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L1_008_000M1_scaffold_1445_18
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20380..21111
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_46FAA RepID=F3AV76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85447.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
Uncharacterized conserved protein, contains FHA domain
L1_008_000M1_scaffold_1445_19
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21133..22182
DNA (1050bp) protein (350aa)
CobQ/CobB/MinD/ParA nucleotide binding domain n=1 Tax=Eubacterium eligens CAG:72 RepID=R5ZSV4_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain {ECO:0000313|EMBL:CDA41920.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
CobQ/CobB/MinD/ParA nucleotide binding domain.
L1_008_000M1_scaffold_1445_20
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22196..22468
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KPN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68775.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
YukD.
L1_008_000M1_scaffold_1445_21
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22470..26975
DNA (4506bp) protein (1502aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KPS4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY68773.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L1_008_000M1_scaffold_1445_22
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27048..27341
DNA (294bp) protein (98aa)
Proteins of 100 residues with WXG n=1 Tax=Roseburia sp. CAG:45 RepID=R6NYQ8_9FIRM
Proteins of 100 residues with WXG {ECO:0000313|EMBL:CDC13514.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
Proteins of 100 residues with WXG.
L1_008_000M1_scaffold_1445_23
unknown

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27419..27817
DNA (399bp) protein (133aa)

This feature has no annotations

L1_008_000M1_scaffold_1445_24
unknown

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27814..28122
DNA (309bp) protein (103aa)

This feature has no annotations

L1_008_000M1_scaffold_1445_25
unknown

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28138..28416
DNA (279bp) protein (93aa)

This feature has no annotations

L1_008_000M1_scaffold_1445_26
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28430..29611
DNA (1182bp) protein (394aa)
Rhs family protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KPL7_9CLOT
Rhs family protein {ECO:0000313|EMBL:CCY68755.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L1_008_000M1_scaffold_1445_27
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29626..30420
DNA (795bp) protein (265aa)
Tetratricopeptide TPR_1 repeat-containing protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KUH3_9CLOT
Tetratricopeptide TPR_1 repeat-containing protein {ECO:0000313|EMBL:CCY68754.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
L1_008_000M1_scaffold_1445_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30587..31390
DNA (804bp) protein (268aa)
Putative transposase YhgA-like n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5I9_9CLOT
Putative transposase YhgA-like {ECO:0000313|EMBL:CDD73399.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
conserved hypothetical protein (putative transposase or invertase)
L1_008_000M1_scaffold_1445_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31595..34156
DNA (2562bp) protein (854aa)
Fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CBL5_9CLOT
Fibronectin type III domain protein {ECO:0000313|EMBL:CDD75117.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
GBS Bsp-like repeat./CHAP domain./Fibronectin type III domain.
L1_008_000M1_scaffold_1445_30
unknown

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34208..34303
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 30 items

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