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L1_008_000M1_scaffold_1861

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1861_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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92..1060
DNA (969bp) protein (323aa)
EDD domain protein DegV family n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVK2_9FIRM
EDD domain protein DegV family {ECO:0000313|EMBL:CDD35429.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DegV family protein
L1_008_000M1_scaffold_1861_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1099..1623
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNJ3_9FIRM
L1_008_000M1_scaffold_1861_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1673..3031
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3G1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35431.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
MFS transporter xanthine/uracil permease
L1_008_000M1_scaffold_1861_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3055..4866
DNA (1812bp) protein (604aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZY67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35432.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC transporter
L1_008_000M1_scaffold_1861_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4883..6124
DNA (1242bp) protein (414aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C990_9CLOT
L1_008_000M1_scaffold_1861_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6121..6789
DNA (669bp) protein (223aa)
Methyltransferase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YID0_9FIRM
Methyltransferase {ECO:0000313|EMBL:CDD35713.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1861_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6898..7110
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8T4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74516.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_1861_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7616..8440)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z494_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35711.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1861_9
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8620..10401
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QXE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF41960.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
sensory transduction protein kinase
L1_008_000M1_scaffold_1861_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10402..11028)
DNA (627bp) protein (209aa)
Putative phosphoesterase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPD6_9FIRM
Putative phosphoesterase {ECO:0000313|EMBL:CDD35710.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Predicted phosphoesterase or phosphohydrolase
L1_008_000M1_scaffold_1861_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11043..11420)
DNA (378bp) protein (126aa)
Thioesterase superfamily n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWG6_9FIRM
Thioesterase superfamily {ECO:0000313|EMBL:CDD35709.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Thioesterase superfamily
L1_008_000M1_scaffold_1861_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12202..12873)
DNA (672bp) protein (224aa)
Glycosyl hydrolase family 25 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIC2_9FIRM
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:CDD35708.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_1861_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12912..13982)
DNA (1071bp) protein (357aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Histidinol-phosphate aminotransferase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZYX8_9FIRM
histidinol-phosphate aminotransferase
L1_008_000M1_scaffold_1861_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13992..15176)
DNA (1185bp) protein (395aa)
Aminotransferase class I and II n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z489_9FIRM
Aminotransferase class I and II {ECO:0000313|EMBL:CDD35706.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
aspartate aminotransferase
L1_008_000M1_scaffold_1861_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15206..17299)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35705.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
methyl-accepting chemotaxis protein
L1_008_000M1_scaffold_1861_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17345..18292)
DNA (948bp) protein (316aa)
Esterase / lipase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWG0_9FIRM
Esterase / lipase {ECO:0000313|EMBL:CDD35704.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
esterase / lipase
L1_008_000M1_scaffold_1861_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18917..20611)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35703.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
peptidase S8/S53 subtilisin kexin sedolisin
L1_008_000M1_scaffold_1861_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20619..21539)
DNA (921bp) protein (307aa)
CorA-like protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCK5_9FIRM
CorA-like protein {ECO:0000313|EMBL:EDM64172.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Mg2+ and Co2+ transporters
L1_008_000M1_scaffold_1861_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21536..23260)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35700.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Na+/Pi-cotransporter
L1_008_000M1_scaffold_1861_20
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23788..26157)
DNA (2370bp) protein (790aa)
Ferrous iron transport protein B n=1 Tax=Clostridium sp. CAG:127 RepID=R5NVW9_9CLOT
Ferrous iron transport protein B {ECO:0000313|EMBL:CCZ07983.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
ferrous iron transporter FeoB
L1_008_000M1_scaffold_1861_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26170..26838)
DNA (669bp) protein (223aa)
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z469_9FIRM
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein {ECO:0000313|EMBL:CDD35681.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
thrH; phosphoserine phosphatase
L1_008_000M1_scaffold_1861_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26879..27067)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C833_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74130.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_1861_23
Treponema saccharophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(27075..30344)
DNA (3270bp) protein (1090aa)
Putative uncharacterized protein n=1 Tax=Treponema saccharophilum DSM 2985 RepID=H7EIZ9_9SPIO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EIC02456.1}; Flags: Precursor;; TaxID=907348 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema saccharophilum DSM 2985.;"
L1_008_000M1_scaffold_1861_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30520..30855)
DNA (336bp) protein (112aa)
Putative halomucin n=1 Tax=Roseburia sp. CAG:309 RepID=R6YI93_9FIRM
Putative halomucin {ECO:0000313|EMBL:CDD35678.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
Displaying 24 items

View Taxonomy