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L1_008_000M1_scaffold_2961

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2961_1
unknown

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2..247
DNA (246bp) protein (82aa)

This feature has no annotations

L1_008_000M1_scaffold_2961_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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722..2092
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YSD1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34349.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
lipoprotein
L1_008_000M1_scaffold_2961_3
unknown

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2173..2544
DNA (372bp) protein (124aa)

This feature has no annotations

L1_008_000M1_scaffold_2961_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2713..4026
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZY48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35407.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
protein of unknown function DUF4143
L1_008_000M1_scaffold_2961_5
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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4288..4548
DNA (261bp) protein (87aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MX96_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EOS75413.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
sporulation transcriptional regulator SpoIIID
L1_008_000M1_scaffold_2961_6
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4668..5009
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AXL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32856.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Predicted nucleotidyltransferases
L1_008_000M1_scaffold_2961_7
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4996..5415
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JLG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29051.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
L1_008_000M1_scaffold_2961_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5592..6917
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z2G7_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
electron transport complex, RnfABCDGE type, C subunit
L1_008_000M1_scaffold_2961_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6947..7942
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZX84_9FIRM
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
electron transport complex, RnfABCDGE type, D subunit
L1_008_000M1_scaffold_2961_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7935..8633
DNA (699bp) protein (233aa)
Electron transport complex RnfABCDGE type G subunit n=1 Tax=Roseburia sp. CAG:309 RepID=R6YGH2_9FIRM
Electron transport complex RnfABCDGE type G subunit {ECO:0000313|EMBL:CDD35083.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_2961_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8630..9340
DNA (711bp) protein (237aa)
Putative electron transport complex protein RnfE n=1 Tax=Roseburia sp. CAG:309 RepID=R6YUJ6_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
RnfABCDGE type electron transport complex subunit E
L1_008_000M1_scaffold_2961_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9337..9912
DNA (576bp) protein (192aa)
Electron transport complex n=1 Tax=Clostridium sp. CAG:62 RepID=R7C508_9CLOT
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
electron transport complex, RnfABCDGE type, A subunit
L1_008_000M1_scaffold_2961_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9931..10716
DNA (786bp) protein (262aa)
Electron transport complex RnfABCDGE type B subunit n=1 Tax=Roseburia sp. CAG:309 RepID=R6YMN6_9FIRM
Electron transport complex RnfABCDGE type B subunit {ECO:0000313|EMBL:CDD35085.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
electron transport complex protein RnfB
L1_008_000M1_scaffold_2961_14
unknown

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10794..11036
DNA (243bp) protein (81aa)

This feature has no annotations

L1_008_000M1_scaffold_2961_15
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11133..11921
DNA (789bp) protein (263aa)
RHS repeat-associated core domain protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C994_9CLOT
RHS repeat-associated core domain protein {ECO:0000313|EMBL:CDD74525.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
RHS repeat-associated core domain-containing protein
Displaying 15 items

View Taxonomy