ggKbase home page

L1_008_000M1_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_98_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

238..1191
DNA (954bp) protein (318aa)
K+-dependent Na+/Ca+ exchanger family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YDZ1_9FIRM
K+-dependent Na+/Ca+ exchanger family protein {ECO:0000313|EMBL:CDD34193.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_98_2
unknown

Not on your lists

comp(1142..1333)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_98_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1491..2645)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YRX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34194.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_98_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2797..2964)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34195.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_98_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3006..3647)
DNA (642bp) protein (214aa)
ABC transporter permease n=1 Tax=Roseburia sp. CAG:309 RepID=R6YZY9_9FIRM
ABC transporter permease {ECO:0000313|EMBL:CDD34196.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_98_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3650..4342)
DNA (693bp) protein (231aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZUK2_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD34197.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_98_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4329..4781)
DNA (453bp) protein (151aa)
Putative membrane protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YDZ4_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDD34198.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_98_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4778..5941)
DNA (1164bp) protein (388aa)
Putative membrane protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YDZ4_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDD34198.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_98_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5938..6603)
DNA (666bp) protein (222aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Roseburia sp. CAG:309 RepID=R6YRX9_9FIRM
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDD34199.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_008_000M1_scaffold_98_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6613..7650)
DNA (1038bp) protein (346aa)
Efflux ABC transporter permease protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJY2_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD34200.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_98_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7661..8851)
DNA (1191bp) protein (397aa)
BH3504 protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YZZ2_9FIRM
BH3504 protein {ECO:0000313|EMBL:CDD34201.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_98_12
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8931..10844)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5N0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73401.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_98_13
Ruminococcus sp. CAG:108, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10837..11532)
DNA (696bp) protein (232aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:108 RepID=R5E362_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX82591.1}; TaxID=1262950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:108.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_98_14
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11552..13114)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5J3_9CLOT
putative secreted protein
Putative secreted protein {ECO:0000313|EMBL:CDZ23533.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
L1_008_000M1_scaffold_98_15
unknown

Not on your lists

comp(13151..13792)
DNA (642bp) protein (214aa)

This feature has no annotations

L1_008_000M1_scaffold_98_16
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13782..14522)
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VL52_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC92921.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_98_17
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14509..16008)
DNA (1500bp) protein (500aa)
Putative membrane protein n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QKI6_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC33494.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
hypothetical protein
L1_008_000M1_scaffold_98_18
unknown

Not on your lists

comp(15995..16222)
DNA (228bp) protein (76aa)

This feature has no annotations

L1_008_000M1_scaffold_98_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16436..17059)
DNA (624bp) protein (208aa)
ABC-type multidrug transport system, ATPase component n=4 Tax=Eubacterium RepID=D4JT84_9FIRM
ABC transporter ATPase component
ABC transporter ATPase component {ECO:0000313|EMBL:CCO04521.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_98_20
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17052..17912)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7G5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74119.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_98_21
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17905..18666)
DNA (762bp) protein (254aa)
Putative membrane protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C824_9CLOT
Putative membrane protein {ECO:0000313|EMBL:CDD74120.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_98_22
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18699..19814)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74121.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_98_23
unknown

Not on your lists

comp(19889..20323)
DNA (435bp) protein (145aa)

This feature has no annotations

L1_008_000M1_scaffold_98_24
unknown

Not on your lists

comp(20346..20486)
DNA (141bp) protein (47aa)

This feature has no annotations

L1_008_000M1_scaffold_98_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20874..21245
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZUK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34202.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_98_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21238..21618
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YDZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34203.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_98_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21637..22116
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YRY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34204.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_98_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22164..22727)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34205.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_98_29
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22728..23957)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PTA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK47351.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L1_008_000M1_scaffold_98_30
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24519..24782
DNA (264bp) protein (88aa)
RelB/DinJ family addiction module antitoxin n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJN9_9FIRM
RelB/DinJ family addiction module antitoxin {ECO:0000313|EMBL:EGN31430.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
addiction module antitoxin, RelB/DinJ family
Displaying items 1-30 of 124 in total

View Taxonomy