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L1_008_000M1_scaffold_269

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_269_1
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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221..433
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_63FAA RepID=F3AGX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG81398.1}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
L1_008_000M1_scaffold_269_2
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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446..937
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RXA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74219.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L1_008_000M1_scaffold_269_3
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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934..1377
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QLL2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22857.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_269_4
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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1367..1795
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RX99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74217.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_269_5
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1905..2234)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET60722.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Fic/DOC family.
L1_008_000M1_scaffold_269_6
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2434..4272
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Clostridium sp. CAG:277 RepID=R7JWM7_9CLOT
L1_008_000M1_scaffold_269_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4291..4899
DNA (609bp) protein (203aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YM55_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDD34940.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_269_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4911..5378
DNA (468bp) protein (156aa)
VanZ-like protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z202_9FIRM
VanZ-like protein {ECO:0000313|EMBL:CDD34941.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_269_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5389..6081)
DNA (693bp) protein (231aa)
Putative TIGR00659 family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWR6_9FIRM
Putative TIGR00659 family protein {ECO:0000313|EMBL:CDD34942.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
holin-like protein LrgB
L1_008_000M1_scaffold_269_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6074..6442)
DNA (369bp) protein (123aa)
Putative effector of murein hydrolase LrgA n=1 Tax=Roseburia sp. CAG:309 RepID=R6YG09_9FIRM
Putative effector of murein hydrolase LrgA {ECO:0000313|EMBL:CDD34943.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
holin-like protein
L1_008_000M1_scaffold_269_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6629..8428
DNA (1800bp) protein (600aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Methionine synthase I (cobalamin-dependent), methyltransferase domain (EC:2.1.1.10 2.1.1.13)
Methylenetetrahydrofolate reductase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YU60_9FIRM
L1_008_000M1_scaffold_269_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8438..8797)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YM62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34945.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_269_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8982..9176
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YG13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34948.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_269_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9160..10836
DNA (1677bp) protein (559aa)
3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YU64_9FIRM
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:CDD34949.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_269_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10829..11725
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YM69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34950.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_269_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11722..15255
DNA (3534bp) protein (1178aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z214_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34951.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_269_17
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15260..16408
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6E6B5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA85777.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
Selenocysteine lyase
L1_008_000M1_scaffold_269_18
Planococcus sp. PAMC 21323, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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16412..18550
DNA (2139bp) protein (713aa)
Type III restriction protein res subunit n=1 Tax=Caldicellulosiruptor kronotskyensis (strain DSM 18902 / VKM B-2412 / 2002) RepID=E4SC21_CALK2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY06813.1}; TaxID=1526927 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus sp. PAMC 21323.;"
L1_008_000M1_scaffold_269_19
unknown

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18540..18707
DNA (168bp) protein (56aa)

This feature has no annotations

L1_008_000M1_scaffold_269_20
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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18721..20733
DNA (2013bp) protein (671aa)
hypothetical protein n=1 Tax=Lachnobacterium bovis RepID=UPI0003B542F5
Putative DNA sulfur modification protein DndD {ECO:0000313|EMBL:EEX70106.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
hypothetical protein
L1_008_000M1_scaffold_269_21
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

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20736..21239
DNA (504bp) protein (168aa)
Uncharacterized protein id=2106395 bin=GWB2_Chloroflexi_54_36 species=Fusobacterium necrophorum genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII59480.1}; TaxID=1432060 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi CG4.;"
L1_008_000M1_scaffold_269_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21320..22273
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZX35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35027.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_269_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22363..22482
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YGC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35028.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_269_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22695..23405
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YUF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35029.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_269_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23433..24782
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z2C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35031.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
multidrug resistance protein, MATE family, drug/sodium antiporter
L1_008_000M1_scaffold_269_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24779..25897
DNA (1119bp) protein (373aa)
CobW/HypB/UreG protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZX41_9FIRM
CobW/HypB/UreG protein {ECO:0000313|EMBL:CDD35032.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Putative GTPases (G3E family)
L1_008_000M1_scaffold_269_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25913..26869
DNA (957bp) protein (319aa)
Putative TIGR03943 family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YGC6_9FIRM
Putative TIGR03943 family protein {ECO:0000313|EMBL:CDD35033.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
G3E family GTPase-like protein
L1_008_000M1_scaffold_269_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26946..28151
DNA (1206bp) protein (402aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Roseburia sp. CAG:309 RepID=R6YUF9_9FIRM
L1_008_000M1_scaffold_269_29
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28181..29491
DNA (1311bp) protein (437aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Phosphomethylpyrimidine synthase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YMJ4_9FIRM
hypothetical protein
L1_008_000M1_scaffold_269_30
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29568..31184
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z2D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35036.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
SpoIID/LytB domain-containing protein
Displaying items 1-30 of 56 in total

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