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L1_008_000M1_scaffold_330

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_330_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(67..609)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34840.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
sporulation protein YqfD
L1_008_000M1_scaffold_330_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(620..874)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34839.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_330_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1187..1363)
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFQ2_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
rpsU; 30S ribosomal protein S21
L1_008_000M1_scaffold_330_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1488..4127)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWG2_9FIRM
L1_008_000M1_scaffold_330_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4251..5495)
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1N8_9FIRM
L1_008_000M1_scaffold_330_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5522..6124)
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLU6_9FIRM
5-formyltetrahydrofolate cyclo-ligase
L1_008_000M1_scaffold_330_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6124..6351)
DNA (228bp) protein (76aa)
UPF0291 protein BN600_01136 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTV4_9FIRM
UPF0291 protein BN600_01136 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_330_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6358..7191)
DNA (834bp) protein (278aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFP6_9FIRM
L1_008_000M1_scaffold_330_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7191..8804)
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34832.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Uncharacterized FAD-dependent dehydrogenases
L1_008_000M1_scaffold_330_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8806..9969)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34831.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
conserved hypothetical protein TIGR00275
L1_008_000M1_scaffold_330_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10112..10699)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34830.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_330_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10974..12179)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36043.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_008_000M1_scaffold_330_13
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12517..12774)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5P623_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ09744.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L1_008_000M1_scaffold_330_14
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12898..13299)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7INT1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDE52968.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
L1_008_000M1_scaffold_330_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13289..13741)
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E225_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89465.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L1_008_000M1_scaffold_330_16
unknown

Not on your lists

comp(13873..15192)
DNA (1320bp) protein (440aa)

This feature has no annotations

L1_008_000M1_scaffold_330_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15635..18847)
DNA (3213bp) protein (1071aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=Roseburia sp. CAG:309 RepID=R6YQB9_9FIRM
carB; carbamoyl phosphate synthase large subunit
L1_008_000M1_scaffold_330_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18863..19960)
DNA (1098bp) protein (366aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Carbamoyl-phosphate synthase small chain n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5B8_9FIRM
carbamoyl-phosphate synthase small subunit
L1_008_000M1_scaffold_330_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19979..20521)
DNA (543bp) protein (181aa)
Response regulator receiver and ANTAR domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZY8_9FIRM
Response regulator receiver and ANTAR domain protein {ECO:0000313|EMBL:CDD36047.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
response regulator receiver/ANTAR domain-containing protein
L1_008_000M1_scaffold_330_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20587..21900)
DNA (1314bp) protein (438aa)
glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase type I n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJD4_9FIRM
Glutamine synthetase type I {ECO:0000313|EMBL:CDD36048.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_330_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22005..23486)
DNA (1482bp) protein (494aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.14 1.4.1.13)
Glutamate synthase (NADH) small subunit n=1 Tax=Roseburia sp. CAG:309 RepID=R6YXH5_9FIRM
Glutamate synthase (NADH) small subunit {ECO:0000313|EMBL:CDD36049.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_330_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23540..28102)
DNA (4563bp) protein (1521aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Glutamate synthase domain 2 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YQC3_9FIRM
Glutamate synthase domain 2 {ECO:0000313|EMBL:CDD36050.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_330_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28311..29498)
DNA (1188bp) protein (396aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Acetylornithine aminotransferase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C764_9CLOT
ArgD; PLP-dependent aminotransferase
L1_008_000M1_scaffold_330_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29511..30413)
DNA (903bp) protein (301aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZZ3_9FIRM
L1_008_000M1_scaffold_330_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30447..31670)
DNA (1224bp) protein (408aa)
bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein (EC:2.3.1.1)
Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJD9_9FIRM
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_330_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31733..32773)
DNA (1041bp) protein (347aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
N-acetyl-gamma-glutamyl-phosphate reductase, common form (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YXH9_9FIRM
L1_008_000M1_scaffold_330_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32792..33934)
DNA (1143bp) protein (381aa)
Fibronectin type III domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YQC6_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:CDD36055.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_330_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34523..35746
DNA (1224bp) protein (408aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z5C5_9FIRM
L1_008_000M1_scaffold_330_29
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35927..36892)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R9V6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF46545.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
L1_008_000M1_scaffold_330_30
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37171..37314)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36057.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Displaying items 1-30 of 51 in total

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