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L1_008_000M1_scaffold_333

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_333_1
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57..290)
DNA (234bp) protein (78aa)
Transposase n=1 Tax=Clostridium sp. CAG:81 RepID=R5GFI0_9CLOT
Transposase {ECO:0000313|EMBL:CCY11577.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Transposase and inactivated derivatives
L1_008_000M1_scaffold_333_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

549..1706
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C896_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74384.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_333_3
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1722..2495
DNA (774bp) protein (258aa)
Cohesin domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G7R1_9FIRM
Cohesin domain protein {ECO:0000313|EMBL:CCY13345.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Bacterial surface proteins containing Ig-like domains
L1_008_000M1_scaffold_333_4
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2432..3739)
DNA (1308bp) protein (436aa)
Sensor histidine kinase putative VirS n=1 Tax=Roseburia sp. CAG:380 RepID=R6WLE2_9FIRM
Sensor histidine kinase putative VirS {ECO:0000313|EMBL:CDC94947.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L1_008_000M1_scaffold_333_5
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3748..4461)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KU12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY70360.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
Response regulator of the LytR/AlgR family
L1_008_000M1_scaffold_333_6
unknown

Not on your lists

4873..5133
DNA (261bp) protein (87aa)

This feature has no annotations

L1_008_000M1_scaffold_333_7
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5219..6325
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8M0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74446.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_333_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6338..8419
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C921_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74445.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_333_9
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8421..9134
DNA (714bp) protein (238aa)
ABC-2 type transport system ATP-binding protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8E9_9CLOT
ABC-2 type transport system ATP-binding protein {ECO:0000313|EMBL:CDD74444.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_333_10
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9251..9763
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IP35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE53236.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
Transposase and inactivated derivatives
L1_008_000M1_scaffold_333_11
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9869..10207
DNA (339bp) protein (113aa)
Radical SAM additional 4Fe4S-binding domain protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0I4_CLOCD
radical SAM additional 4Fe4S-binding domain protein
Radical SAM additional 4Fe4S-binding domain protein {ECO:0000313|EMBL:AEV68029.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_333_12
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10191..11948
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0MUP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB86374.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ABC transporter
L1_008_000M1_scaffold_333_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12066..12356
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34746.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
transposase IS3/IS911 family protein
L1_008_000M1_scaffold_333_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12379..13527
DNA (1149bp) protein (383aa)
Cell surface protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZW74_9FIRM
Cell surface protein {ECO:0000313|EMBL:CDD34747.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
fibronectin type III domain-containing protein
L1_008_000M1_scaffold_333_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13524..13877
DNA (354bp) protein (118aa)
Cell surface protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZW74_9FIRM
Cell surface protein {ECO:0000313|EMBL:CDD34747.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_333_16
unknown

Not on your lists

14184..14273
DNA (90bp) protein (30aa)

This feature has no annotations

L1_008_000M1_scaffold_333_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14236..15468
DNA (1233bp) protein (411aa)
Regulator of chromosome condensation RCC1 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIR8_9FIRM
Regulator of chromosome condensation RCC1 {ECO:0000313|EMBL:CDD35838.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_333_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15485..16033
DNA (549bp) protein (183aa)
Phosphoglycerate mutase family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWT1_9FIRM
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CDD35839.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
phosphoglycerate mutase
L1_008_000M1_scaffold_333_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16065..16661
DNA (597bp) protein (199aa)
Nitroreductase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPP9_9FIRM
Nitroreductase {ECO:0000313|EMBL:CDD35840.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Nitroreductase
L1_008_000M1_scaffold_333_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16724..18799)
DNA (2076bp) protein (692aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z4M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35841.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_333_21
unknown

Not on your lists

19502..19909
DNA (408bp) protein (136aa)

This feature has no annotations

L1_008_000M1_scaffold_333_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20045..20962
DNA (918bp) protein (306aa)
Plant-metabolite dehydrogenase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWT6_9FIRM
Plant-metabolite dehydrogenase {ECO:0000313|EMBL:CDD35844.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
plant-metabolite dehydrogenase
L1_008_000M1_scaffold_333_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21058..21921
DNA (864bp) protein (288aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPQ5_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD35845.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_333_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21953..24361
DNA (2409bp) protein (803aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
leucyl-tRNA synthetase, eubacterial and mitochondrial family (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z4M7_9FIRM
L1_008_000M1_scaffold_333_25
unknown

Not on your lists

24483..24776
DNA (294bp) protein (98aa)

This feature has no annotations

L1_008_000M1_scaffold_333_26
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24800..26578)
DNA (1779bp) protein (593aa)
Flagellar hook-length control protein FliK./TOBE domain n=1 Tax=Clostridium sp. CAG:167 RepID=R5W4P1_9CLOT
Flagellar hook-length control protein FliK./TOBE domain {ECO:0000313|EMBL:CCZ90716.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
Flagellar hook-length control protein FliK.
L1_008_000M1_scaffold_333_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26598..27821)
DNA (1224bp) protein (408aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA polymerase IV n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHF6_9FIRM
DNA-directed DNA polymerase
L1_008_000M1_scaffold_333_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28006..28785)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35404.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_333_29
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28961..29602
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YKZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34505.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
GDSL-like Lipase/Acylhydrolase
L1_008_000M1_scaffold_333_30
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29639..30514
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YSY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34504.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Displaying items 1-30 of 61 in total

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