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L1_008_000M1_scaffold_363

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_363_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(237..593)
DNA (357bp) protein (119aa)
Response regulator domain-containing protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLZ9_9FIRM
Response regulator domain-containing protein {ECO:0000313|EMBL:CDD34885.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
response regulator domain-containing protein
L1_008_000M1_scaffold_363_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(631..1497)
DNA (867bp) protein (289aa)
Chemotaxis protein CheY n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1T8_9FIRM
Chemotaxis protein CheY {ECO:0000313|EMBL:CDD34886.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
two-component system, chemotaxis family, response regulator CheY
L1_008_000M1_scaffold_363_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1675..2778
DNA (1104bp) protein (368aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWL5_9FIRM
L1_008_000M1_scaffold_363_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2840..2962
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34888.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_363_5
unknown

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2973..3227
DNA (255bp) protein (85aa)

This feature has no annotations

L1_008_000M1_scaffold_363_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3360..4718
DNA (1359bp) protein (453aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Glycosyl hydrolase family 3 N-terminal domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YM03_9FIRM
Beta-glucosidase-related glycosidases
L1_008_000M1_scaffold_363_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4761..5474
DNA (714bp) protein (238aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1U4_9FIRM
L1_008_000M1_scaffold_363_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5490..6926
DNA (1437bp) protein (479aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Amidophosphoribosyltransferase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWM0_9FIRM
amidophosphoribosyltransferase
L1_008_000M1_scaffold_363_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7148..8602
DNA (1455bp) protein (485aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFV8_9FIRM
L1_008_000M1_scaffold_363_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8658..10127
DNA (1470bp) protein (490aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
adenylosuccinate synthase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWM5_9FIRM
L1_008_000M1_scaffold_363_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10201..10674
DNA (474bp) protein (158aa)
Sodium/proton antiporter ShaE n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFW5_9FIRM
Sodium/proton antiporter ShaE {ECO:0000313|EMBL:CDD34898.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Multisubunit Na+/H+ antiporter, MnhE subunit
L1_008_000M1_scaffold_363_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10668..10970
DNA (303bp) protein (101aa)
Multisubunit Na+/H+ antiporter MnhF subunit n=1 Tax=Roseburia sp. CAG:309 RepID=R6YU13_9FIRM
Multisubunit Na+/H+ antiporter MnhF subunit {ECO:0000313|EMBL:CDD34899.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Multisubunit Na+/H+ antiporter, MnhF subunit
L1_008_000M1_scaffold_363_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10975..11289
DNA (315bp) protein (105aa)
Monovalent cation/proton antiporter MnhG/PhaG family n=1 Tax=Roseburia sp. CAG:309 RepID=R6YM15_9FIRM
Monovalent cation/proton antiporter MnhG/PhaG family {ECO:0000313|EMBL:CDD34900.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Multisubunit Na+/H+ antiporter, MnhG subunit
L1_008_000M1_scaffold_363_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11286..11576
DNA (291bp) protein (97aa)
pH adaptation potassium efflux system protein B 1 sodium/hydrogen antiporter subunit n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1V4_9FIRM
pH adaptation potassium efflux system protein B 1 sodium/hydrogen antiporter subunit {ECO:0000313|EMBL:CDD34901.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_363_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11573..12559
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34902.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Multisubunit Na+/H+ antiporter, MnhB subunit
L1_008_000M1_scaffold_363_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12561..12929
DNA (369bp) protein (123aa)
Sodium/proton antiporter n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFX0_9FIRM
Sodium/proton antiporter {ECO:0000313|EMBL:CDD34903.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
sodium/proton antiporter
L1_008_000M1_scaffold_363_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12935..14422
DNA (1488bp) protein (496aa)
Putative NADH dehydrogenase/oxidoreductase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YU18_9FIRM
Putative NADH dehydrogenase/oxidoreductase {ECO:0000313|EMBL:CDD34904.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
L1_008_000M1_scaffold_363_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14461..15930
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YM20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34905.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
L1_008_000M1_scaffold_363_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15956..17434
DNA (1479bp) protein (493aa)
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit (EC:1.6.99.5)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1W0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34906.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_363_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17450..19231
DNA (1782bp) protein (594aa)
Sodium/proton antiporter ShaA n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZWN4_9FIRM
Sodium/proton antiporter ShaA {ECO:0000313|EMBL:CDD34907.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
L1_008_000M1_scaffold_363_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19249..20271
DNA (1023bp) protein (341aa)
[LSU ribosomal protein L11P]-lysine N-methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFX6_9FIRM
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:CDD34908.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_363_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20483..21019
DNA (537bp) protein (179aa)
Putative RNA polymerase sigma factor n=1 Tax=Roseburia sp. CAG:309 RepID=R6YU24_9FIRM
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CDD34909.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_000M1_scaffold_363_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21016..22896
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34743.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_363_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22964..23233
DNA (270bp) protein (90aa)
Putative negative regulator of flagellin synthesis n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZW69_9FIRM
Putative negative regulator of flagellin synthesis {ECO:0000313|EMBL:CDD34742.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Anti-sigma-28 factor, FlgM.
L1_008_000M1_scaffold_363_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23278..23793
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34741.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_363_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23867..25648
DNA (1782bp) protein (594aa)
Flagellar hook-associated protein FlgK n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLL7_9FIRM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CDD34740.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
flagellar hook-associated protein FlgK
L1_008_000M1_scaffold_363_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25674..27536
DNA (1863bp) protein (621aa)
Flagellar hook-associated protein FlgK n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTL0_9FIRM
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:CDD34739.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
flagellar hook-associated protein FlgK
L1_008_000M1_scaffold_363_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27554..29038
DNA (1485bp) protein (495aa)
Flagellar hook-associated protein 3 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YFE1_9FIRM
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:CDD34738.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
flagellar hook-associated protein 3
L1_008_000M1_scaffold_363_29
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29060..29515
DNA (456bp) protein (152aa)
Flagellar assembly factor FliW n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZW65_9FIRM
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_363_30
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29519..29737
DNA (219bp) protein (73aa)
Carbon storage regulator homolog n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1E9_9FIRM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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