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L1_008_000M1_scaffold_454

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_454_1
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

128..751
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VJ73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56358.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L1_008_000M1_scaffold_454_2
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1021..2361
DNA (1341bp) protein (447aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5DZ61_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CCX85488.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_454_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2707..4074
DNA (1368bp) protein (456aa)
Multidrug resistance protein MATE family n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJR4_9FIRM
Multidrug resistance protein MATE family {ECO:0000313|EMBL:CDD34130.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
multidrug resistance protein, MATE family
L1_008_000M1_scaffold_454_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4153..5538
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YZT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34131.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
glycoside/pentoside/hexuronide:cation symporter, GPH family
L1_008_000M1_scaffold_454_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5535..6362
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZUE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34132.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_6
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6359..8128
DNA (1770bp) protein (590aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EL86_9FIRM
glycoside hydrolase family protein
L1_008_000M1_scaffold_454_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8076..9467
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34135.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9464..10045)
DNA (582bp) protein (194aa)
Putative manganese efflux pump MntP n=1 Tax=Roseburia sp. CAG:309 RepID=R6YZU3_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Predicted membrane protein
L1_008_000M1_scaffold_454_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10880..12220
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YEY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34533.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12377..13213
DNA (837bp) protein (279aa)
Sporulation transcriptional activator Spo0A n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZVP4_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
sporulation transcriptional activator Spo0A
L1_008_000M1_scaffold_454_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13365..15695
DNA (2331bp) protein (777aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z0Y8_9FIRM
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:CDD34531.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_454_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15719..16354
DNA (636bp) protein (212aa)
Zn-dependent hydrolases including glyoxylases n=1 Tax=Roseburia sp. CAG:309 RepID=R6YL16_9FIRM
Zn-dependent hydrolases including glyoxylases {ECO:0000313|EMBL:CDD34530.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Zn-dependent hydrolases, including glyoxylases
L1_008_000M1_scaffold_454_13
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16369..17787
DNA (1419bp) protein (473aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases n=1 Tax=Clostridium sp. CAG:167 RepID=R5W3B4_9CLOT
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases {ECO:0000313|EMBL:CCZ90281.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
L1_008_000M1_scaffold_454_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


17794..19044
DNA (1251bp) protein (417aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YEY0_9FIRM
Histidyl-tRNA synthetase {ECO:0000313|EMBL:CDD34528.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_454_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19074..20867
DNA (1794bp) protein (598aa)
Aspartate--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZVP0_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDD34527.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
aspartyl-tRNA synthetase
L1_008_000M1_scaffold_454_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20864..21901
DNA (1038bp) protein (346aa)
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z0Y3_9FIRM
Aldose 1-epimerase {ECO:0000313|EMBL:CDD34526.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_454_17
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21974..22402
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74573.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_454_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22399..23838
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YL13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34525.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23863..24549
DNA (687bp) protein (229aa)
Channel protein hemolysin III family n=1 Tax=Roseburia sp. CAG:309 RepID=R6YT02_9FIRM
Channel protein hemolysin III family {ECO:0000313|EMBL:CDD34524.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_20
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24566..25723
DNA (1158bp) protein (386aa)
Putative reductase BN512_00178 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
trans-2-enoyl-CoA reductase (EC:1.3.1.44)
Putative reductase CLOL250_02032 n=1 Tax=Clostridium sp. CAG:167 RepID=R5W6E0_9CLOT
L1_008_000M1_scaffold_454_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25807..26265
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YP58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35620.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26262..26732
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YW78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35619.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26753..29122)
DNA (2370bp) protein (790aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YI32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35618.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29476..30294
DNA (819bp) protein (273aa)
LytTr DNA-binding domain n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIT1_9FIRM
LytTr DNA-binding domain {ECO:0000313|EMBL:CDD35848.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
LytTr DNA-binding domain.
L1_008_000M1_scaffold_454_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30447..32792
DNA (2346bp) protein (782aa)
Putative Gly-rich membrane protein Bcell_0380 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YWU1_9FIRM
Putative Gly-rich membrane protein Bcell_0380 {ECO:0000313|EMBL:CDD35849.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_454_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32827..33723
DNA (897bp) protein (299aa)
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPR0_9FIRM
Lipopolysaccharide biosynthesis proteins LPS:glycosyltransferases {ECO:0000313|EMBL:CDD35850.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases
L1_008_000M1_scaffold_454_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33716..37459
DNA (3744bp) protein (1248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JWT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE68424.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L1_008_000M1_scaffold_454_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37521..39452)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZZB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35852.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ATPase components of ABC transporters with duplicated ATPase domains
L1_008_000M1_scaffold_454_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39576..40208
DNA (633bp) protein (211aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAN7_9CLOT
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
CoA-binding protein
L1_008_000M1_scaffold_454_30
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40228..40818
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YIT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35853.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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