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L1_008_000M1_scaffold_499

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_499_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(75..497)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZXX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35332.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_499_2
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

657..974
DNA (318bp) protein (106aa)
DNA-binding helix-turn-helix protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LVT6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHO52043.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
Cro/CI family transcriptional regulator
L1_008_000M1_scaffold_499_3
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

975..2342
DNA (1368bp) protein (456aa)
Toxin-antitoxin system, toxin component domain protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LVT7_9FIRM
Toxin-antitoxin system, toxin component domain protein {ECO:0000313|EMBL:EHO52044.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
hypothetical protein
L1_008_000M1_scaffold_499_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2441..3934
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YH83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35333.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Ig-like domain-containing surface protein
L1_008_000M1_scaffold_499_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3952..5946
DNA (1995bp) protein (665aa)
Clostripain family n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVA2_9FIRM
Clostripain family {ECO:0000313|EMBL:CDD35334.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Clostripain family.
L1_008_000M1_scaffold_499_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6066..9869
DNA (3804bp) protein (1268aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNA3_9FIRM
DNA-directed RNA polymerase subunit beta
L1_008_000M1_scaffold_499_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9914..13681
DNA (3768bp) protein (1256aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z351_9FIRM
DNA-directed RNA polymerase subunit beta'
L1_008_000M1_scaffold_499_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13889..16957)
DNA (3069bp) protein (1023aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZXX8_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDD35337.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
diguanylate cyclase (GGDEF) domain
L1_008_000M1_scaffold_499_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17174..18697
DNA (1524bp) protein (508aa)
DNA mismatch repair protein MutS domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNA7_9FIRM
DNA mismatch repair protein MutS domain protein {ECO:0000313|EMBL:CDD35340.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA mismatch repair protein MutS domain-containing protein
L1_008_000M1_scaffold_499_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18690..20201
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z357_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35341.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA mismatch repair protein MutS domain-containing protein
L1_008_000M1_scaffold_499_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20445..21053)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZXY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35342.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_499_12
unknown

Not on your lists

21520..21861
DNA (342bp) protein (114aa)

This feature has no annotations

L1_008_000M1_scaffold_499_13
unknown

Not on your lists

21889..22158
DNA (270bp) protein (90aa)

This feature has no annotations

L1_008_000M1_scaffold_499_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22242..22853
DNA (612bp) protein (204aa)
Spore maturation protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YH93_9FIRM
Spore maturation protein {ECO:0000313|EMBL:CDD35343.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
nucleoside recognition domain containing protein
L1_008_000M1_scaffold_499_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22850..23371
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35344.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
nucleoside recognition domain-containing protein
L1_008_000M1_scaffold_499_16

Not on your lists

comp(23358..25295)
DNA (1938bp) protein (646aa)
Glycosyl hydrolase family 43 n=1 Tax=Bacteroides sp. CAG:633 RepID=R6G716_9BACE
Family 43 glycosyl hydrolase {ECO:0000313|EMBL:AHF26057.1}; TaxID=1393656 species="Bacteria; environmental samples.;" source="uncultured bacterium Contigcl_1748.;"
family 43 glycosyl hydrolase
L1_008_000M1_scaffold_499_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25441..26082
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35345.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_499_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26266..26841
DNA (576bp) protein (192aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z363_9FIRM
L1_008_000M1_scaffold_499_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26850..28865
DNA (2016bp) protein (672aa)
Arylsulfotransferase (ASST) n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZXY9_9FIRM
Arylsulfotransferase (ASST) {ECO:0000313|EMBL:CDD35347.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Arylsulfotransferase (ASST).
L1_008_000M1_scaffold_499_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28827..29681)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YH97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35348.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_499_21
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29819..31513
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K158_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE70025.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_008_000M1_scaffold_499_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31630..32847
DNA (1218bp) protein (406aa)
UPF0348 protein BN600_01622 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVB5_9FIRM
UPF0348 protein BN600_01622 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_499_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32863..33207
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35350.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_499_24
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33278..34549
DNA (1272bp) protein (424aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z367_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDD35351.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
tlpC; methyl-accepting chemotaxis protein TlpC
L1_008_000M1_scaffold_499_25
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34659..35963)
DNA (1305bp) protein (435aa)
thymidine phosphorylase (EC:2.4.2.4 2.4.2.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5W2M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ90026.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
L1_008_000M1_scaffold_499_26
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36133..37686
DNA (1554bp) protein (518aa)
Sodium:proline symporter n=1 Tax=Clostridium sp. CAG:75 RepID=R5TCT9_9CLOT
Sodium:proline symporter {ECO:0000313|EMBL:CCZ54947.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
putP; sodium/proline symporter
L1_008_000M1_scaffold_499_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37795..39024
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35354.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
sodium/proton-potassium antiporter GerN, CPA2 family (TC 2.A.37.2.2)
L1_008_000M1_scaffold_499_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39332..39793)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YDT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34113.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_499_29
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39884..40606)
DNA (723bp) protein (241aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YRQ2_9FIRM
L1_008_000M1_scaffold_499_30
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40627..41760)
DNA (1134bp) protein (378aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Roseburia sp. CAG:380 RepID=R6V4A9_9FIRM
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:CDC93008.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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