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L1_008_000M1_scaffold_556

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_556_1
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(231..689)
DNA (459bp) protein (153aa)
Hydrolase, NUDIX family n=1 Tax=Ruminococcus albus 8 RepID=E9SCT9_RUMAL
Hydrolase, NUDIX family {ECO:0000313|EMBL:EGC02921.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L1_008_000M1_scaffold_556_2
Coprococcus sp. CAG:782, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(800..2569)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:782 RepID=R5JNN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY54344.1}; TaxID=1262863 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:782.;"
hypothetical protein
L1_008_000M1_scaffold_556_3
unknown

Not on your lists

comp(2566..2841)
DNA (276bp) protein (92aa)

This feature has no annotations

L1_008_000M1_scaffold_556_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2901..3194
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C5R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD73275.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_556_5
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3203..4936)
DNA (1734bp) protein (578aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Clostridium sp. CAG:62 RepID=R7C785_9CLOT
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CDD73800.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
methyl-accepting chemotaxis sensory transducer
L1_008_000M1_scaffold_556_6
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5077..5667)
DNA (591bp) protein (197aa)
Ribosomal protein L25 Ctc-form n=1 Tax=Clostridium sp. CAG:167 RepID=R5W638_9CLOT
50S ribosomal protein L25 {ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|SAAS:SAAS00023360}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
ribosomal protein L25, Ctc-form
L1_008_000M1_scaffold_556_7
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5814..6314)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VJ38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ90718.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
hypothetical protein
L1_008_000M1_scaffold_556_8
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6329..8032)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C7R1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74131.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_556_9
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8056..9141)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM50807.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L1_008_000M1_scaffold_556_10
unknown

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comp(9155..9517)
DNA (363bp) protein (121aa)

This feature has no annotations

L1_008_000M1_scaffold_556_11
unknown

Not on your lists

comp(9701..10135)
DNA (435bp) protein (145aa)

This feature has no annotations

L1_008_000M1_scaffold_556_12
unknown

Not on your lists

comp(10553..10771)
DNA (219bp) protein (73aa)

This feature has no annotations

L1_008_000M1_scaffold_556_13
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10937..13879)
DNA (2943bp) protein (981aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LQ42_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42333.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Ig-like domain-containing surface protein
L1_008_000M1_scaffold_556_14
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13912..14586)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9S4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74914.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
L1_008_000M1_scaffold_556_15
unknown

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comp(14623..15288)
DNA (666bp) protein (222aa)

This feature has no annotations

L1_008_000M1_scaffold_556_16
unknown

Not on your lists

comp(15285..16349)
DNA (1065bp) protein (355aa)

This feature has no annotations

L1_008_000M1_scaffold_556_17
unknown

Not on your lists

comp(16367..16729)
DNA (363bp) protein (121aa)

This feature has no annotations

L1_008_000M1_scaffold_556_18
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16744..17412)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5W6K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ91386.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
hypothetical protein
L1_008_000M1_scaffold_556_19
unknown

Not on your lists

comp(17455..18036)
DNA (582bp) protein (194aa)

This feature has no annotations

L1_008_000M1_scaffold_556_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(18237..18887)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FGU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01277.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_556_21
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18985..20061
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K0R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60305.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
hypothetical protein
L1_008_000M1_scaffold_556_22
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20105..20500)
DNA (396bp) protein (132aa)
C_GCAxxG_C_C family probable redox protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC16_9FIRM
C_GCAxxG_C_C family probable redox protein {ECO:0000313|EMBL:CDE36861.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
C_GCAxxG_C_C family probable redox protein
L1_008_000M1_scaffold_556_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20525..21292)
DNA (768bp) protein (256aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8T0_9CLOT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDD74147.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Short-chain dehydrogenases of various substrate specificities
L1_008_000M1_scaffold_556_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21344..22477)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C8K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23684.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Fic family protein
L1_008_000M1_scaffold_556_25
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22653..23765
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VI83_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ90130.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
Predicted hydrolase (metallo-beta-lactamase superfamily)
L1_008_000M1_scaffold_556_26
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23820..24356)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YM29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25704.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000M1_scaffold_556_27
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24578..25276)
DNA (699bp) protein (233aa)
Predicted DNA alkylation repair enzyme n=1 Tax=Coprococcus sp. CAG:131 RepID=R6M067_9FIRM
Predicted DNA alkylation repair enzyme {ECO:0000313|EMBL:CDB79582.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
Predicted DNA alkylation repair enzyme
L1_008_000M1_scaffold_556_28
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25278..26633)
DNA (1356bp) protein (452aa)
MatE protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7RAA0_9FIRM
MatE protein {ECO:0000313|EMBL:CDF47008.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_556_29
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26912..27586
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:253 RepID=R6LQA9_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB89613.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_556_30
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27583..28863
DNA (1281bp) protein (427aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:167 RepID=R5VK03_9CLOT
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Displaying items 1-30 of 47 in total

View Taxonomy