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L1_008_000M1_scaffold_987

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_987_1
unknown

Not on your lists

28..486
DNA (459bp) protein (153aa)

This feature has no annotations

L1_008_000M1_scaffold_987_2
Clostridium sp. CAG:167, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

575..2554
DNA (1980bp) protein (660aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Clostridium sp. CAG:167 RepID=R5W7S0_9CLOT
NAD+ synthetase {ECO:0000313|EMBL:CCZ91806.1}; TaxID=1262777 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:167.;"
L1_008_000M1_scaffold_987_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2557..3009)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34684.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_987_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3105..6500
DNA (3396bp) protein (1132aa)
ATP-dependent helicase/deoxyribonuclease subunit B n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLG4_9FIRM
ATP-dependent helicase/deoxyribonuclease subunit B {ECO:0000313|EMBL:CDD34685.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ATP-dependent nuclease subunit B
L1_008_000M1_scaffold_987_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6484..10002
DNA (3519bp) protein (1173aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1A1_9FIRM
recombination helicase AddA, Firmicutes type
L1_008_000M1_scaffold_987_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10015..10728
DNA (714bp) protein (238aa)
Methyltransferase domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZW25_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDD34687.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
methyltransferase type 11
L1_008_000M1_scaffold_987_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10757..12661
DNA (1905bp) protein (635aa)
SH3 type 3 domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YF90_9FIRM
SH3 type 3 domain protein {ECO:0000313|EMBL:CDD34688.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
SH3 type 3 domain-containing protein
L1_008_000M1_scaffold_987_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12692..13990
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34689.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_987_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14275..16737
DNA (2463bp) protein (821aa)
ATPase AAA-2 domain protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLG8_9FIRM
ATPase AAA-2 domain protein {ECO:0000313|EMBL:CDD34690.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ATPase
L1_008_000M1_scaffold_987_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16824..17237
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1A6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34691.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_987_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17320..18717
DNA (1398bp) protein (466aa)
DNA repair protein radA n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZW28_9FIRM
DNA repair protein radA {ECO:0000313|EMBL:CDD34692.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA repair protein RadA
L1_008_000M1_scaffold_987_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18710..19144
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YF94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34693.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_987_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19276..19707)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YTG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34694.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_987_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19816..21273)
DNA (1458bp) protein (486aa)
NlpC/P60 family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YLH5_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:CDD34695.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_008_000M1_scaffold_987_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21563..21940)
DNA (378bp) protein (126aa)
Putative endoribonuclease L-PSP n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z1A8_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CDD34696.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
endoribonuclease L-PSP
L1_008_000M1_scaffold_987_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22137..22748
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZW30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34697.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_987_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22791..24899
DNA (2109bp) protein (703aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Beta-1 4-xylanase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YF99_9FIRM
Beta-1,4-xylanase
L1_008_000M1_scaffold_987_18
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25734..26918
DNA (1185bp) protein (395aa)
Major Facilitator Superfamily n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GYP7_9FIRM
Major Facilitator Superfamily {ECO:0000313|EMBL:CCY17867.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
Major Facilitator Superfamily.
L1_008_000M1_scaffold_987_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27065..30526
DNA (3462bp) protein (1154aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YDU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34138.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_987_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31143..33101
DNA (1959bp) protein (653aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJS3_9FIRM
L1_008_000M1_scaffold_987_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33120..33509
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YZU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34141.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_987_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33528..33923
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZUF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34142.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_987_23
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34140..34580)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YDV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34143.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_987_24
unknown

Not on your lists

34767..34874
DNA (108bp) protein (36aa)

This feature has no annotations

L1_008_000M1_scaffold_987_25
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34849..37575
DNA (2727bp) protein (909aa)
Glycoside hydrolase family 43 n=1 Tax=Clostridium sp. CAG:62 RepID=R7C6Y4_9CLOT
Glycoside hydrolase family 43 {ECO:0000313|EMBL:CDD73836.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_987_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37823..40423
DNA (2601bp) protein (867aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YRS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34144.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
N-acetylmuramoyl-L-alanine amidase
L1_008_000M1_scaffold_987_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41132..41626
DNA (495bp) protein (165aa)
Translation initiation factor IF-3 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YDV6_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
translation initiation factor IF-3
L1_008_000M1_scaffold_987_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


41673..41876
DNA (204bp) protein (68aa)
50S ribosomal protein L35 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YRS7_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
rpmI; 50S ribosomal protein L35
L1_008_000M1_scaffold_987_29
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


41915..42271
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Roseburia sp. CAG:309 RepID=R6YJT3_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
LSU ribosomal protein L20P
L1_008_000M1_scaffold_987_30
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42351..44033
DNA (1683bp) protein (561aa)
Zinc carboxypeptidase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YZV2_9FIRM
Zinc carboxypeptidase {ECO:0000313|EMBL:CDD34151.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Predicted carboxypeptidase
Displaying items 1-30 of 46 in total

View Taxonomy