ggKbase home page

L1_008_000M1_scaffold_1089

Search features with annotation key words

Displaying 22 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1089_1
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1155
DNA (1155bp) protein (385aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00030A1C0D
L1_008_000M1_scaffold_1089_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1160..3751
DNA (2592bp) protein (864aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002D28036
Uncharacterized protein {ECO:0000313|EMBL:EXM40263.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
L1_008_000M1_scaffold_1089_3
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3770..7060
DNA (3291bp) protein (1097aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00035D5C53
Uncharacterized protein {ECO:0000313|EMBL:EXM40265.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
putative helicase
L1_008_000M1_scaffold_1089_4
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7057..9510
DNA (2454bp) protein (818aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00030E6D9E
Uncharacterized protein {ECO:0000313|EMBL:EXM39897.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
putative helicase
L1_008_000M1_scaffold_1089_5
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9510..10328
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI000310D973
Uncharacterized protein {ECO:0000313|EMBL:EXM40266.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
L1_008_000M1_scaffold_1089_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10328..13510
DNA (3183bp) protein (1061aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002EF50CA
Uncharacterized protein {ECO:0000313|EMBL:EXM40267.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
hypothetical protein
L1_008_000M1_scaffold_1089_7
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13510..14172
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002F2F530
Uncharacterized protein {ECO:0000313|EMBL:EXM40268.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
L1_008_000M1_scaffold_1089_8
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14587..15729
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9SFC2_RUMAL
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05216.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15784..15957)
DNA (174bp) protein (58aa)
DNA binding domain-containing protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U418_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05218.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16095..16190
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T708_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05219.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_11
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16252..17364
DNA (1113bp) protein (371aa)
LIM zinc-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWI3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05220.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17367..18308
DNA (942bp) protein (314aa)
Class II glutamine amidotransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCF0_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:CDC65501.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L1_008_000M1_scaffold_1089_13
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18319..18636
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SZX1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05222.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18780..19118)
DNA (339bp) protein (113aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6Z6_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05223.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19437..20690
DNA (1254bp) protein (418aa)
Uncharacterized protein/domain associated with GTPase-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TCE2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05224.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20690..21856
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6X1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05225.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_17
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21870..22985
DNA (1116bp) protein (372aa)
Conserved domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SWE9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05226.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L1_008_000M1_scaffold_1089_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23200..25536
DNA (2337bp) protein (779aa)
hsdR; Type I restriction enzyme, R subunit (EC:3.1.21.3)
Type I restriction enzyme, R subunit {ECO:0000313|EMBL:CCO05227.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CCO05227.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL94_CLOSC
L1_008_000M1_scaffold_1089_19
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25540..27012
DNA (1473bp) protein (491aa)
hsdM; Type I restriction enzyme M protein (EC:2.1.1.72)
Type I restriction enzyme M protein {ECO:0000313|EMBL:CCO05228.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CCO05228.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Type I restriction-modification system methyltransferase subunit n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL93_CLOSC
L1_008_000M1_scaffold_1089_20
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27017..27982
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=E7FR46_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EFZ34433.1}; TaxID=525362 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis ATCC 25644.;"
hypothetical protein
L1_008_000M1_scaffold_1089_21
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27993..28577
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=E7FR47_9LACO
Uncharacterized protein {ECO:0000313|EMBL:EFZ34434.1}; TaxID=525362 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis ATCC 25644.;"
hypothetical protein
L1_008_000M1_scaffold_1089_22
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28574..28861
DNA (288bp) protein (96aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8R8M3_9FIRM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDP12107.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
hsdS-3; type i restriction-modification system, s subunit
Displaying 22 items

View Taxonomy