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L1_008_000M1_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 847 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_30_1
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

386..1300
DNA (915bp) protein (305aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
metA; Homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J0X6_9CLOT
L1_008_000M1_scaffold_30_2
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1419..2309)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 IPR5_9CLOT">RepID=R6IPR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52338.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L1_008_000M1_scaffold_30_3
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2436..3377)
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQE1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52337.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Predicted beta-xylosidase
L1_008_000M1_scaffold_30_4
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3626..4186
DNA (561bp) protein (187aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3N0_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CDB52336.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L1_008_000M1_scaffold_30_5
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4245..4739)
DNA (495bp) protein (165aa)
HD domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISS8_9CLOT
HD domain protein {ECO:0000313|EMBL:CDB52335.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
HD domain protein
L1_008_000M1_scaffold_30_6
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4736..6262)
DNA (1527bp) protein (509aa)
SSS sodium solute transporter n=1 Tax=Clostridium sp. CAG:217 RepID=R6J0X0_9CLOT
SSS sodium solute transporter {ECO:0000313|EMBL:CDB52334.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
sodium/proline symporter
L1_008_000M1_scaffold_30_7
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6480..7586
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 IPR0_9CLOT">RepID=R6IPR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52333.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L1_008_000M1_scaffold_30_8
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


7882..9585
DNA (1704bp) protein (568aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
prolyl-tRNA synthetase, family II (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQD8_9CLOT
L1_008_000M1_scaffold_30_9
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9582..10064
DNA (483bp) protein (161aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3M5_9CLOT
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CDB52331.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L1_008_000M1_scaffold_30_10
Firmicutes bacterium CAG:341, Firmicutes, Bacteria

Not on your lists

comp(10119..10718)
DNA (600bp) protein (200aa)
Manganese containing catalase n=1 Tax=Firmicutes bacterium CAG:341 RepID=R7BF28_9FIRM
Manganese containing catalase {ECO:0000313|EMBL:CDD64369.1}; TaxID=1263019 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:341.;"
manganese containing catalase
L1_008_000M1_scaffold_30_11
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10897..12393
DNA (1497bp) protein (499aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3Q1_9CLOT
L1_008_000M1_scaffold_30_12
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12461..13795)
DNA (1335bp) protein (445aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQG3_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CDB52362.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_30_13
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14031..14477
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3Q6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52366.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
hypothetical protein
L1_008_000M1_scaffold_30_14
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14474..15157
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52367.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
L1_008_000M1_scaffold_30_15
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15223..17982)
DNA (2760bp) protein (920aa)
AAA domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IPU1_9CLOT
AAA domain protein {ECO:0000313|EMBL:CDB52368.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
sbcC; exonuclease SbcC
L1_008_000M1_scaffold_30_16
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17979..19118)
DNA (1140bp) protein (380aa)
Exonuclease SbcCD D subunit n=1 Tax=Clostridium sp. CAG:217 RepID=R6J107_9CLOT
Exonuclease SbcCD D subunit {ECO:0000313|EMBL:CDB52369.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
exonuclease SbcD
L1_008_000M1_scaffold_30_17
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19291..20616
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52370.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
carboxylesterase type b
L1_008_000M1_scaffold_30_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20617..22914
DNA (2298bp) protein (766aa)
Glycoside hydrolase family 31 n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3R1_9CLOT
Glycoside hydrolase family 31 {ECO:0000313|EMBL:CDB52371.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycosyl hydrolase family protein
L1_008_000M1_scaffold_30_19
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23039..23413
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52372.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
transcriptional regulator, MerR family
L1_008_000M1_scaffold_30_20
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23433..25184
DNA (1752bp) protein (584aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
dxs2; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Eubacterium sp. CAG:251 RepID=R6QAZ1_9FIRM
L1_008_000M1_scaffold_30_21
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25196..25687
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J113_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52374.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Flavodoxins
L1_008_000M1_scaffold_30_22
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25801..26142
DNA (342bp) protein (114aa)
Cupin domain protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6ISW9_9CLOT
Cupin domain protein {ECO:0000313|EMBL:CDB52375.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Uncharacterized conserved protein, contains double-stranded beta-helix domain
L1_008_000M1_scaffold_30_23
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26242..27588)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J3R6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB52376.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
peptidase M28
L1_008_000M1_scaffold_30_24
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27861..28469)
DNA (609bp) protein (203aa)
Ferrous iron transport protein B n=1 Tax=Clostridium sp. CAG:217 RepID=R6JQH7_9CLOT
Ferrous iron transport protein B {ECO:0000313|EMBL:CDB52377.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
feoB; ferrous iron transport protein B
L1_008_000M1_scaffold_30_25
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28663..30168
DNA (1506bp) protein (502aa)
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Clostridium sp. CAG:678 RepID=R5L426_9CLOT
Methylmalonate-semialdehyde dehydrogenase (Acylating) {ECO:0000313|EMBL:CCY68006.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
methylmalonate-semialdehyde dehydrogenase
L1_008_000M1_scaffold_30_26
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30416..30961
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6IXW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51289.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
ribosome-associated factor y
L1_008_000M1_scaffold_30_27
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31138..32469
DNA (1332bp) protein (444aa)
glutamate dehydrogenase (NADP(+)) (EC:1.4.1.4)
Glutamate dehydrogenase n=1 Tax=Clostridium sp. CAG:217 RepID=R6IPU0_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
L1_008_000M1_scaffold_30_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32588..33217
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=root RepID=R6HZ70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42365.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
TetR family transcriptional regulator
L1_008_000M1_scaffold_30_29
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33292..34737
DNA (1446bp) protein (482aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Clostridium sp. CAG:217 RepID=R6J0X3_9CLOT
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:CDB51346.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
glycoside transporter
L1_008_000M1_scaffold_30_30
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34843..35340)
DNA (498bp) protein (166aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. CAG:217 RepID=R6J0R7_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDB51291.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
Displaying items 1-30 of 847 in total

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