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L1_008_000M1_scaffold_3213

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_3213_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..217
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B4B1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67065.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
toxin-antitoxin system
L1_008_000M1_scaffold_3213_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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214..648
DNA (435bp) protein (145aa)
Resolvase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AMJ6_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI67064.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Resolvase domain-containing protein
L1_008_000M1_scaffold_3213_3
unknown

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comp(554..1147)
DNA (594bp) protein (198aa)

This feature has no annotations

L1_008_000M1_scaffold_3213_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(1630..2517)
DNA (888bp) protein (296aa)
Transcriptional regulator LysR n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J136_9FIRM
Transcriptional regulator LysR {ECO:0000313|EMBL:CCY42736.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
LysR family transcriptional regulator
L1_008_000M1_scaffold_3213_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2654..4096
DNA (1443bp) protein (481aa)
SSS sodium solute transporter superfamily n=2 Tax=Eubacterium RepID=D4JLR5_9FIRM
SSS sodium solute transporter superfamily
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:CDC74283.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L1_008_000M1_scaffold_3213_6
unknown

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4312..4902
DNA (591bp) protein (197aa)

This feature has no annotations

L1_008_000M1_scaffold_3213_7
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(5033..5716)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CWE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72218.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L1_008_000M1_scaffold_3213_8
unknown

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comp(6227..6502)
DNA (276bp) protein (92aa)

This feature has no annotations

L1_008_000M1_scaffold_3213_9

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comp(6543..6953)
DNA (411bp) protein (137aa)
def; peptide deformylase (EC:3.5.1.88)
N-formylmethionyl-tRNA deformylase n=1 Tax=human gut metagenome RepID=K1TF33_9ZZZZ
N-formylmethionyl-tRNA deformylase {ECO:0000313|EMBL:EKC68388.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_000M1_scaffold_3213_10
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7070..8605)
DNA (1536bp) protein (512aa)
ferredoxin hydrogenase, large subunit (EC:1.12.7.2)
4Fe-4S binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAA8_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDS11786.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_008_000M1_scaffold_3213_11
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8628..9422)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VT76_9CLOT
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_3213_12
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9419..10036)
DNA (618bp) protein (206aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AWX5_9FIRM
RNA polymerase ECF subfamily sigma factor
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_3213_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(10041..11012)
DNA (972bp) protein (324aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
tRNA-dihydrouridine synthase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B8U6_9FIRM
dus; tRNA-dihydrouridine synthase
L1_008_000M1_scaffold_3213_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(11019..11633)
DNA (615bp) protein (205aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXW4_9FIRM
Displaying 14 items

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