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L1_008_000M1_scaffold_1541

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1541_1
Oribacterium sp. oral taxon 078, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(227..1258)
DNA (1032bp) protein (344aa)
LD-carboxypeptidase n=1 Tax=Oribacterium sp. oral taxon 078 str. F0262 RepID=D4CQV3_9FIRM
LD-carboxypeptidase {ECO:0000313|EMBL:EFE90487.1}; TaxID=608534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 078 str. F0262.;"
putative carboxypeptidase
L1_008_000M1_scaffold_1541_2
Firmicutes bacterium CAG:536, Firmicutes, Bacteria

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1381..1788
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:536 RepID=R5ZCI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA34349.1}; TaxID=1263028 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:536.;"
thioesterase superfamily protein
L1_008_000M1_scaffold_1541_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(2054..4126)
DNA (2073bp) protein (691aa)
2-enoate reductase (EC:1.3.1.31)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CWN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81008.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L1_008_000M1_scaffold_1541_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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4424..5746
DNA (1323bp) protein (441aa)
MATE domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B380_9FIRM
MATE domain protein {ECO:0000313|EMBL:CCX45911.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L1_008_000M1_scaffold_1541_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5795..6940)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QW39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK57502.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L1_008_000M1_scaffold_1541_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(6951..7415)
DNA (465bp) protein (155aa)
Putative small multi-drug export protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENG3_9FIRM
Putative small multi-drug export protein {ECO:0000313|EMBL:CDB02128.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_008_000M1_scaffold_1541_7
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7458..9890)
DNA (2433bp) protein (811aa)
E1-E2 ATPase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J1U0_9FIRM
ATPase, P-type (transporting), HAD superfamily, subfamily IC
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_1541_8
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(10026..11192)
DNA (1167bp) protein (389aa)
Putative phosphoglycerate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IGZ0_9FIRM
Putative phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CDB44616.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
putative oxidoreductase
L1_008_000M1_scaffold_1541_9
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11185..12276)
DNA (1092bp) protein (364aa)
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZQ6_9FIRM
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_1541_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(12357..13649)
DNA (1293bp) protein (431aa)
2-methylthioadenine synthetase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATB1_9FIRM
2-methylthioadenine synthetase {ECO:0000313|EMBL:CCX46218.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_1541_11
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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13680..14813
DNA (1134bp) protein (378aa)
Cysteine desulfurase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AW77_9FIRM
Cysteine desulfurase {ECO:0000313|EMBL:CCX46219.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
iscS; cysteine desulfurase
L1_008_000M1_scaffold_1541_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14885..15370
DNA (486bp) protein (162aa)
Acetyltransferase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3DG72_CLODI
Acetyltransferase family protein {ECO:0000313|EMBL:EQF26924.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
N-acetyltransferase GCN5
L1_008_000M1_scaffold_1541_13
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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15630..16778
DNA (1149bp) protein (383aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I9C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43049.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L1_008_000M1_scaffold_1541_14
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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16853..18121
DNA (1269bp) protein (423aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Glucose-6-phosphate isomerase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1A7_9FIRM
glucose-6-phosphate isomerase
L1_008_000M1_scaffold_1541_15
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

18237..18647
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43051.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L1_008_000M1_scaffold_1541_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

18649..18888
DNA (240bp) protein (80aa)
S4 domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AW81_9FIRM
S4 domain protein {ECO:0000313|EMBL:CCX46224.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_008_000M1_scaffold_1541_17
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18943..19899)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KM76_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41419.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_1541_18
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(19969..20850)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LY84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB88634.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_1541_19
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20867..21700)
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AE887C
TolA protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_1541_20
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22047..22487)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MUX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS71602.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
Predicted transcription factor, homolog of eukaryotic MBF1
L1_008_000M1_scaffold_1541_21
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22493..23026)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AJY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42154.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_1541_22
unknown

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comp(23385..23996)
DNA (612bp) protein (204aa)

This feature has no annotations

L1_008_000M1_scaffold_1541_23
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24201..24521)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MGE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY90543.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L1_008_000M1_scaffold_1541_24
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(24990..25664)
DNA (675bp) protein (225aa)
Spore cortex-lytic enzyme n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDY9_9FIRM
Spore cortex-lytic enzyme {ECO:0000313|EMBL:CDB44799.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
spore cortex-lytic protein
L1_008_000M1_scaffold_1541_25
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(25729..27477)
DNA (1749bp) protein (583aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I9V5_9FIRM
L1_008_000M1_scaffold_1541_26
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(27762..28406)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SJT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46961.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L1_008_000M1_scaffold_1541_27
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28460..29650)
DNA (1191bp) protein (397aa)
Ribosome-binding ATPase YchF n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CT49_9FIRM
engD; GTP-dependent nucleic acid-binding protein EngD
Tax=BJP_IG2069_Clostridiales_48_15
Displaying 27 items

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