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L1_008_000M1_scaffold_2115

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2115_1
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(490..678)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=2 Tax=environmental samples RepID=R5CU22_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
rpmB; 50S ribosomal protein L28
L1_008_000M1_scaffold_2115_2
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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902..1834
DNA (933bp) protein (311aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CXY0_9FIRM
L1_008_000M1_scaffold_2115_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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1831..2739
DNA (909bp) protein (303aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ASF7_9FIRM
L1_008_000M1_scaffold_2115_4
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2769..3635
DNA (867bp) protein (289aa)
UPF0042 nucleotide-binding protein BN503_01004 n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T3M6_9FIRM
Nucleotide-binding protein BN503_01004 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
hypothetical protein
L1_008_000M1_scaffold_2115_5
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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3662..4636
DNA (975bp) protein (325aa)
Putative gluconeogenesis factor n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D1Q1_9FIRM
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L1_008_000M1_scaffold_2115_6
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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4658..5548
DNA (891bp) protein (297aa)
Hypothetical Cytosolic Protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D6B0_9FIRM
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_2115_7
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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5550..9053
DNA (3504bp) protein (1168aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
dnaE; DNA polymerase III alpha subunit (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CU16_9FIRM
L1_008_000M1_scaffold_2115_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9428..11251
DNA (1824bp) protein (608aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98262.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
RND family efflux transporter MFP subunit
L1_008_000M1_scaffold_2115_9
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11256..11927
DNA (672bp) protein (224aa)
ABC transporter ATP-binding protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WNC9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA04913.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
PhnL; ABC transporter
L1_008_000M1_scaffold_2115_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11924..13111
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036796EB
Uncharacterized protein {ECO:0000313|EMBL:CCY98260.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_2115_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13113..15062
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98262.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
RND family efflux transporter MFP subunit
L1_008_000M1_scaffold_2115_12
Eubacterium eligens CAG:72, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15503..16555
DNA (1053bp) protein (351aa)
Uncharacterized protein n=2 Tax=root RepID=R5ZKY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA40343.1}; TaxID=1263077 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium eligens CAG:72.;"
hypothetical protein
L1_008_000M1_scaffold_2115_13
unknown

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16558..18060
DNA (1503bp) protein (501aa)

This feature has no annotations

L1_008_000M1_scaffold_2115_14
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(18125..18583)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13641.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
beta-D-galactosidase
L1_008_000M1_scaffold_2115_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18859..19620
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00036A3B91
Transcriptional regulator, IclR family, C-terminal domain protein {ECO:0000313|EMBL:EDO59736.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Transcriptional regulator
L1_008_000M1_scaffold_2115_16
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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19705..20775
DNA (1071bp) protein (357aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QV90_SPHPG
TRAP dicarboxylate family transporter subunit DctP
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:AEV30405.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
L1_008_000M1_scaffold_2115_17
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20857..21537
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A6V4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY01321.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
tripartite ATP-independent periplasmic transporter DctQ component
L1_008_000M1_scaffold_2115_18
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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21538..22881
DNA (1344bp) protein (448aa)
TRAP transporter, DctM subunit n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3K3D6_TREMA
TRAP dicarboxylate transporter subunit DctM
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EPF31471.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
L1_008_000M1_scaffold_2115_19
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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22902..23828
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3KGX4_TREMA
Uncharacterized protein {ECO:0000313|EMBL:EPF31472.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
L1_008_000M1_scaffold_2115_20
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(23916..24362)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YNT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD30276.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_008_000M1_scaffold_2115_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24447..24827)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RFR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46660.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L1_008_000M1_scaffold_2115_22
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24857..25621)
DNA (765bp) protein (255aa)
wapA6; tRNA nuclease WapA (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SLH2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC60805.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
Displaying 22 items

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