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L1_008_000M1_scaffold_2359

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_2359_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..96)
DNA (96bp) protein (32aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R1E5_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDC39014.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_008_000M1_scaffold_2359_2
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(98..712)
DNA (615bp) protein (205aa)
Methyltransferase domain protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AHZ7_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:CDA51573.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L1_008_000M1_scaffold_2359_3
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(824..1441)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000317BC58
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:CDE18812.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
putative TetR family transcriptional regulator
L1_008_000M1_scaffold_2359_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1843..2487
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I4B5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41344.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L1_008_000M1_scaffold_2359_5
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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2571..3269
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP24715.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra ATCC 33270.;"
hypothetical protein
L1_008_000M1_scaffold_2359_6
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3398..3772
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B66144
Uncharacterized protein {ECO:0000313|EMBL:CDA62472.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L1_008_000M1_scaffold_2359_7
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4025..5884
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L0Q2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE80767.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
L1_008_000M1_scaffold_2359_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5903..7882
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BBT1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50312.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L1_008_000M1_scaffold_2359_9
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8011..8406
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AP88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX42532.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
hypothetical protein
L1_008_000M1_scaffold_2359_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8541..9272
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LZ26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63596.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L1_008_000M1_scaffold_2359_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9376..10686)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K4F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ87132.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L1_008_000M1_scaffold_2359_12
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10691..11230)
DNA (540bp) protein (180aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. CAG:413 RepID=R6PS21_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDC12557.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
N-acetyltransferase GCN5
L1_008_000M1_scaffold_2359_13
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(11227..12192)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EB78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX89915.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
diguanylate cyclase (GGDEF) domain
L1_008_000M1_scaffold_2359_14
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12350..12988
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=C0B4S7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG91588.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L1_008_000M1_scaffold_2359_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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13015..13728
DNA (714bp) protein (238aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DE80_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CCX75192.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_2359_16
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13725..15320
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PNF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC11302.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
hypothetical protein
L1_008_000M1_scaffold_2359_17
unknown

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15630..15689
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 17 items

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