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L1_008_000M1_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 149 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_136_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(238..1659)
DNA (1422bp) protein (474aa)
AGCS family alanine or glycine:cation symporter n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA98_9FIRM
AGCS family alanine or glycine:cation symporter {ECO:0000313|EMBL:EGJ47276.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
amino acid carrier protein
L1_008_000M1_scaffold_136_2

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comp(2011..4287)
DNA (2277bp) protein (759aa)
xanthine dehydrogenase, molybdenum binding subunit apoprotein (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding domain protein n=1 Tax=uncultured bacterium RepID=S6CQ53_9BACT
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding domain protein {ECO:0000313|EMBL:CCG34898.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L1_008_000M1_scaffold_136_3

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comp(4284..4757)
DNA (474bp) protein (158aa)
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs (EC:1.2.99.2)
Aerobic type carbon monoxide dehydrogenase small subunit CoxS CutS homologs n=1 Tax=uncultured bacterium RepID=S6CPR1_9BACT
Aerobic type carbon monoxide dehydrogenase small subunit CoxS CutS homologs {ECO:0000313|EMBL:CCG34897.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L1_008_000M1_scaffold_136_4

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comp(4754..5617)
DNA (864bp) protein (288aa)
Aerobic type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs n=1 Tax=uncultured bacterium RepID=S6CP51_9BACT
Aerobic type carbon monoxide dehydrogenase middle subunit CoxM CutM homologs {ECO:0000313|EMBL:CCG34896.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
L1_008_000M1_scaffold_136_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(5763..7493)
DNA (1731bp) protein (577aa)
PF05872 family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S750_9FIRM
PF05872 family protein {ECO:0000313|EMBL:CCZ46639.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
ATP-binding protein
L1_008_000M1_scaffold_136_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(7535..7780)
DNA (246bp) protein (82aa)
30S ribosomal protein S18 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQJ4_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsR; 30S ribosomal protein S18
L1_008_000M1_scaffold_136_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(7806..8276)
DNA (471bp) protein (157aa)
Single-stranded DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUK9_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ssb; single-stranded DNA-binding protein
L1_008_000M1_scaffold_136_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(8291..8587)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=2 Tax=root RepID=R5ARP7_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsF; 30S ribosomal protein S6
L1_008_000M1_scaffold_136_9
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8656..9027)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D0C1_9FIRM
rplL; 50S ribosomal protein L7/L12
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_136_10
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9067..9597)
DNA (531bp) protein (177aa)
50S ribosomal protein L10 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AQR4_9CLOT
rplJ; 50S ribosomal protein L10
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_136_11
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9970..10626)
DNA (657bp) protein (219aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Clostridium sp. M62/1 RepID=D4C7U9_9CLOT
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CBL35560.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L1_008_000M1_scaffold_136_12
unknown

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10781..12148
DNA (1368bp) protein (456aa)

This feature has no annotations

L1_008_000M1_scaffold_136_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12201..12563)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P664_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS12689.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L1_008_000M1_scaffold_136_14
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(12550..12915)
DNA (366bp) protein (122aa)
DNA-binding helix-turn-helix protein n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UMX6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERT60254.1}; TaxID=1111454 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. BV3C16-1.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_136_15
unknown

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13120..13392
DNA (273bp) protein (91aa)

This feature has no annotations

L1_008_000M1_scaffold_136_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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13412..13870
DNA (459bp) protein (153aa)
Terminase small subunit family protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AT05_9FIRM
Terminase small subunit family protein {ECO:0000313|EMBL:CCX46088.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Phage terminase, small subunit
L1_008_000M1_scaffold_136_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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13834..15504
DNA (1671bp) protein (557aa)
Putative terminase large subunit n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AVW7_9FIRM
Putative terminase large subunit {ECO:0000313|EMBL:CCX46089.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative terminase large subunit
L1_008_000M1_scaffold_136_18
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15581..16531)
DNA (951bp) protein (317aa)
Transcriptional regulatory protein n=1 Tax=Clostridium sp. D5 RepID=F0YU03_9CLOT
Transcriptional regulatory protein {ECO:0000313|EMBL:EGB94373.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
DeoR family transcriptional regulator
L1_008_000M1_scaffold_136_19
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16597..17628)
DNA (1032bp) protein (344aa)
Putative sorbitol dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0YU02_9CLOT
Putative sorbitol dehydrogenase {ECO:0000313|EMBL:EGB94372.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
sorbitol dehydrogenase
L1_008_000M1_scaffold_136_20
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17635..18447)
DNA (813bp) protein (271aa)
Aldolase, DeoC/FbaB family n=1 Tax=Clostridium sp. D5 RepID=F0YU01_9CLOT
Aldolase, DeoC/FbaB family {ECO:0000313|EMBL:EGB94371.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
aldolase
L1_008_000M1_scaffold_136_21
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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18882..19799
DNA (918bp) protein (306aa)
Putative glycerol-3-phosphate ABC-transporter, permease component n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YF76_TREAZ
putative glycerol-3-phosphate ABC transporter permease
Putative glycerol-3-phosphate ABC-transporter, permease component {ECO:0000313|EMBL:AEF83174.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
L1_008_000M1_scaffold_136_22
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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19796..20629
DNA (834bp) protein (278aa)
Sugar permease n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YF77_TREAZ
sugar permease
Sugar permease {ECO:0000313|EMBL:AEF80337.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
L1_008_000M1_scaffold_136_23
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20700..22088
DNA (1389bp) protein (463aa)
Putative glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YF78_TREAZ
putative glycerol-3-phosphate ABC transporter periplasmic glycerol-3-phosphate-binding protein
Putative glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein {ECO:0000313|EMBL:AEF81567.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
L1_008_000M1_scaffold_136_24
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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22228..23133
DNA (906bp) protein (302aa)
Sugar phosphate isomerase/epimerase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EPS4_CLOPA
sugar phosphate isomerase/epimerase
Tax=GWC2_Spirochaetes_52_13_curated
L1_008_000M1_scaffold_136_25
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23171..24151)
DNA (981bp) protein (327aa)
Transcriptional regulator n=1 Tax=Blautia sp. CAG:257 RepID=R5XEP5_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDA06916.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
LysR family transcriptional regulator
L1_008_000M1_scaffold_136_26
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24262..25692
DNA (1431bp) protein (477aa)
Aspartate ammonia-lyase n=1 Tax=Clostridium sp. ASF502 RepID=N2AE22_9CLOT
Aspartate ammonia-lyase {ECO:0000313|EMBL:EMZ27677.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
aspartate ammonia-lyase
L1_008_000M1_scaffold_136_27
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26789..27265)
DNA (477bp) protein (159aa)
Predicted flavin-nucleotide-binding protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GU89_9FIRM
Predicted flavin-nucleotide-binding protein
Predicted flavin-nucleotide-binding protein {ECO:0000313|EMBL:CBL41381.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L1_008_000M1_scaffold_136_28
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27290..28618)
DNA (1329bp) protein (443aa)
RNA polymerase sigma factor SigA n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1J9_9FIRM
RpoD family RNA polymerase sigma factor
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_136_29
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(28622..30358)
DNA (1737bp) protein (579aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ID29_9FIRM
L1_008_000M1_scaffold_136_30
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(30440..31444)
DNA (1005bp) protein (335aa)
dgt; Putative dGTPase (EC:3.1.5.1)
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1U3_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000313|EMBL:CDB43295.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Displaying items 1-30 of 149 in total

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