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L1_008_000M1_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_160_1

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comp(1..2076)
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00035DF188
Uncharacterized protein {ECO:0000313|EMBL:CBI02336.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_160_2
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(2498..3961)
DNA (1464bp) protein (488aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EKA5_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L1_008_000M1_scaffold_160_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(3964..5004)
DNA (1041bp) protein (347aa)
Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase (EC:4.1.1.81)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IQQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42589.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_160_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(5005..5964)
DNA (960bp) protein (320aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKE3_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_160_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(5972..7933)
DNA (1962bp) protein (654aa)
precorrin-6x reductase (EC:2.1.1.132)
Precorrin-6x reductase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAR2_9FIRM
Precorrin-6x reductase {ECO:0000313|EMBL:CDA81281.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L1_008_000M1_scaffold_160_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(7926..8672)
DNA (747bp) protein (249aa)
precorrin-3 methyltransferase (EC:2.1.1.131)
Precorrin-3B C(17)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J0X6_9FIRM
Precorrin-3B C(17)-methyltransferase {ECO:0000313|EMBL:CCY42582.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_160_7
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(8665..9684)
DNA (1020bp) protein (340aa)
CbiG n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EXW9_9FIRM
CbiG {ECO:0000313|EMBL:CCX92901.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Cobalamin biosynthesis protein CbiG
L1_008_000M1_scaffold_160_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(9681..10436)
DNA (756bp) protein (252aa)
precorrin-4 C11-methyltransferase (EC:2.1.1.133)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D8D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81284.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L1_008_000M1_scaffold_160_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(10443..11570)
DNA (1128bp) protein (376aa)
Cobalt-precorrin-5B C(1)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00787}; EC=2.1.1.195 {ECO:0000256|HAMAP-Rule:MF_00787};; Cobalt-precorrin-6A synthase {ECO:0000256|HAMAP-Rule:MF_00787}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Putative cobalt-precorrin-6A synthase [deacetylating] n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0H9_9FIRM
cobalamin biosynthesis protein CbiD
L1_008_000M1_scaffold_160_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11572..12195)
DNA (624bp) protein (208aa)
Precorrin isomerase (EC:5.4.1.2)
Precorrin-8X methylmutase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A5E1_9CLOT
Precorrin-8X methylmutase {ECO:0000313|EMBL:CCX36914.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L1_008_000M1_scaffold_160_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(12179..13528)
DNA (1350bp) protein (450aa)
Cobyrinate a,c-diamide synthase {ECO:0000256|HAMAP-Rule:MF_00027}; EC=6.3.5.11 {ECO:0000256|HAMAP-Rule:MF_00027};; Cobyrinic acid a,c-diamide synthetase {ECO:0000256|HAMAP-Rule:MF_00027}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Cobyrinic acid A,C-diamide synthase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKA8_9FIRM
cobyrinic acid a,c-diamide synthase
L1_008_000M1_scaffold_160_12
Clostridium sp. CAG:762, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13885..16218)
DNA (2334bp) protein (778aa)
Spore coat protein CotH n=1 Tax=Clostridium sp. CAG:762 RepID=R5ST62_9CLOT
Spore coat protein CotH {ECO:0000313|EMBL:CCZ56950.1}; TaxID=1262837 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:762.;"
exported protein of unknown function
L1_008_000M1_scaffold_160_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(16215..17054)
DNA (840bp) protein (280aa)
rRNA methylases n=2 Tax=root RepID=R5AZP1_9FIRM
rRNA methylases {ECO:0000313|EMBL:CCX47424.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rRNA methylases
L1_008_000M1_scaffold_160_14
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(17140..19188)
DNA (2049bp) protein (683aa)
UPF0313 protein BN705_00870 n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CYV7_9FIRM
UPF0313 protein BN705_00870 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
UPF0313 protein
L1_008_000M1_scaffold_160_15
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19169..19957)
DNA (789bp) protein (263aa)
Glycoside hydrolase family 1 n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KHM0_CLOPH
glycoside hydrolase family protein
Glycoside hydrolase family 1 {ECO:0000313|EMBL:ABX42305.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_160_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

20099..21571
DNA (1473bp) protein (491aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LTF0_9FIRM
L1_008_000M1_scaffold_160_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

21937..23856
DNA (1920bp) protein (640aa)
Chaperone protein HtpG n=2 Tax=root RepID=R5AWW7_9FIRM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Chaperone protein HtpG
L1_008_000M1_scaffold_160_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

24061..25308
DNA (1248bp) protein (416aa)
hemN; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Putative oxygen-independent coproporphyrinogen III oxidase n=2 Tax=root RepID=R5AQG4_9FIRM
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CCX45218.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L1_008_000M1_scaffold_160_19
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

25491..27539
DNA (2049bp) protein (683aa)
Vancomycin B-type resistance protein VanW n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D5Q8_9FIRM
Vancomycin B-type resistance protein VanW {ECO:0000313|EMBL:CCX72212.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Uncharacterized vancomycin resistance protein
L1_008_000M1_scaffold_160_20
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists


27571..29520
DNA (1950bp) protein (650aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D8L9_9FIRM
L1_008_000M1_scaffold_160_21
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29634..30062
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4ACK3_DESDJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM01688.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L1_008_000M1_scaffold_160_22
unknown

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30151..30720
DNA (570bp) protein (190aa)

This feature has no annotations

L1_008_000M1_scaffold_160_23
unknown

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30763..31326
DNA (564bp) protein (188aa)

This feature has no annotations

L1_008_000M1_scaffold_160_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31585..32412)
DNA (828bp) protein (276aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AFP6_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EFC99361.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
MerR family transcriptional regulator
L1_008_000M1_scaffold_160_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(32443..33339)
DNA (897bp) protein (299aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3V9_9FIRM
Transporter {ECO:0000313|EMBL:CCX46151.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
transmembrane protein
L1_008_000M1_scaffold_160_26
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(33724..34344)
DNA (621bp) protein (207aa)
Epoxide hydrolase domain-like phosphatase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ELM1_9FIRM
Epoxide hydrolase domain-like phosphatase {ECO:0000313|EMBL:CCX93328.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
HAD superfamily hydrolase
L1_008_000M1_scaffold_160_27
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34341..36248)
DNA (1908bp) protein (636aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D034_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEG55308.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
binding-protein-dependent transport systems inner membrane component
L1_008_000M1_scaffold_160_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(36245..37285)
DNA (1041bp) protein (347aa)
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.30)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SLT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45882.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L1_008_000M1_scaffold_160_29
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(37404..38675)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SGJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45881.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L1_008_000M1_scaffold_160_30
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(38831..40321)
DNA (1491bp) protein (497aa)
Phosphoglucomutase/phosphomannomutase family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6D3_9CLOT
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
Tax=BJP_IG2157_Clostridiales_52_13
Displaying items 1-30 of 77 in total

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