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L1_008_000M1_scaffold_213

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_213_1
Eubacterium sp. CAG:252, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1147
-----------------
DNA (1146bp)
protein (382aa)
Multimodular carbohydrate-active enzyme n=1 Tax=Eubacterium sp. CAG:252 RepID=R6L4B7_9FIRM
hypothetical protein
Multimodular carbohydrate-active enzyme {ECO:0000313|EMBL:CDB69092.1}; TaxID=1262887 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:252.;"
L1_008_000M1_scaffold_213_2
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1256..1921)
-----------------
DNA (666bp)
protein (222aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYD3_9FIRM
Predicted transcriptional regulators
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_213_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

2174..3523
-----------------
DNA (1350bp)
protein (450aa)
Branched-chain amino acid transport system II carrier protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMH9_9FIRM
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:CCZ46137.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
branched-chain amino acid transporter II carrier protein
L1_008_000M1_scaffold_213_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(3688..4392)
-----------------
DNA (705bp)
protein (235aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IFG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40868.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_213_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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4649..5023
-----------------
DNA (375bp)
protein (125aa)
Putative endoribonuclease L-PSP n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKM6_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CCY40869.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
endoribonuclease L-PSP
L1_008_000M1_scaffold_213_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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5133..6779
-----------------
DNA (1647bp)
protein (549aa)
Beta-eliminating lyase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IFI9_9FIRM
Beta-eliminating lyase {ECO:0000313|EMBL:CCY40870.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
beta-eliminating lyase
L1_008_000M1_scaffold_213_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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6913..8250
-----------------
DNA (1338bp)
protein (446aa)
Transporter n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IVW5_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
sodium:neurotransmitter symporter family protein
L1_008_000M1_scaffold_213_8
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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8398..9651
-----------------
DNA (1254bp)
protein (418aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LZS9_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB87666.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
cell envelope-related function transcriptional attenuator common domain protein
L1_008_000M1_scaffold_213_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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9993..10634
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IAS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43559.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein predicted by Glimmer/Critica
L1_008_000M1_scaffold_213_10
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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10680..13259
-----------------
DNA (2580bp)
protein (860aa)
ATP-dependent chaperone protein ClpB n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CSG4_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
ATP-dependent chaperone ClpB
L1_008_000M1_scaffold_213_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13412..13627)
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41397.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Predicted transcriptional regulator
L1_008_000M1_scaffold_213_12
Eubacterium sp. CAG:251, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13723..14583
-----------------
DNA (861bp)
protein (287aa)
hypothetical protein n=1 Tax=Bifidobacterium breve RepID=UPI00030C8774
Uncharacterized protein {ECO:0000313|EMBL:CDC32196.1}; TaxID=1262886 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:251.;"
L1_008_000M1_scaffold_213_13
unknown

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comp(14717..14815)
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

L1_008_000M1_scaffold_213_14
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(15045..16484)
-----------------
DNA (1440bp)
protein (480aa)
Amidohydrolase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CT99_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CCX71038.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
amidohydrolase
L1_008_000M1_scaffold_213_15
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(16486..17250)
-----------------
DNA (765bp)
protein (255aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D2D9_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX71037.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
amino acid ABC transporter ATP-binding protein
L1_008_000M1_scaffold_213_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(17237..17920)
-----------------
DNA (684bp)
protein (228aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZY0_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDA81988.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
L1_008_000M1_scaffold_213_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(17985..18923)
-----------------
DNA (939bp)
protein (313aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81989.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
L1_008_000M1_scaffold_213_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(18967..19872)
-----------------
DNA (906bp)
protein (302aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81989.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
L1_008_000M1_scaffold_213_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(20117..21115)
-----------------
DNA (999bp)
protein (333aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DSH4_9FIRM
aspartate semialdehyde dehydrogenase
L1_008_000M1_scaffold_213_20
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(21134..22447)
-----------------
DNA (1314bp)
protein (438aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase id=1933525 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
L1_008_000M1_scaffold_213_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22441..23595)
-----------------
DNA (1155bp)
protein (385aa)
Homoserine dehydrogenase; EC=1.1.1.3;; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Homoserine dehydrogenase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAP4_9CLOT
thrA; Homoserine dehydrogenase
L1_008_000M1_scaffold_213_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(23745..24479)
-----------------
DNA (735bp)
protein (245aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ARN0_9FIRM
hypothetical protein
L1_008_000M1_scaffold_213_23
unknown

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24594..25046
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

L1_008_000M1_scaffold_213_24
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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25110..25406
-----------------
DNA (297bp)
protein (99aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GV04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29303.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L1_008_000M1_scaffold_213_25
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

25568..26560
-----------------
DNA (993bp)
protein (331aa)
ABC-type metal ion transport system periplasmic component/surface adhesin n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AD24_9FIRM
ABC-type metal ion transport system periplasmic component/surface adhesin {ECO:0000313|EMBL:CCX41090.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L1_008_000M1_scaffold_213_26
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

26573..27286
-----------------
DNA (714bp)
protein (238aa)
ABC-type Mn/Zn transport systems, ATPase component (EC:3.6.3.-)
ABC-type Mn/Zn transport systems ATPase component n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6X4_9FIRM
ABC-type Mn/Zn transport systems ATPase component {ECO:0000313|EMBL:CDB29301.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L1_008_000M1_scaffold_213_27
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

27283..28137
-----------------
DNA (855bp)
protein (285aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GXT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29300.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ABC transporter
L1_008_000M1_scaffold_213_28
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

28134..28673
-----------------
DNA (540bp)
protein (180aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AJW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX41087.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
L1_008_000M1_scaffold_213_29
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(28791..29708)
-----------------
DNA (918bp)
protein (306aa)
Putative uncharacterized protein n=1 Tax=Daphnia pulex RepID=E9GA04_DAPPU
Flagellar hook-length control protein FliK {ECO:0000313|EMBL:KFE62964.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
flagellar biosynthesis regulator FlhF
L1_008_000M1_scaffold_213_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(29705..30604)
-----------------
DNA (900bp)
protein (300aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ribC; flavokinase/FAD synthetase (EC:2.7.1.26 2.7.7.2)
Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX87_9FIRM
Displaying items 1-30 of 148 in total

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