ggKbase home page

L1_008_000M1_scaffold_231

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_231_1
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..448
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=3 Tax=root RepID=A7AZQ2_RUMGN
hypothetical protein
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEX21973.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L1_008_000M1_scaffold_231_2
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

441..1994
DNA (1554bp) protein (518aa)
MATE efflux family protein n=3 Tax=Firmicutes RepID=A7AZQ1_RUMGN
MATE efflux family protein {ECO:0000313|EMBL:EFP59918.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
hypothetical protein
L1_008_000M1_scaffold_231_3
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2321..3133)
DNA (813bp) protein (271aa)
Uridine phosphorylase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JWA4_9FIRM
Uridine phosphorylase {ECO:0000313|EMBL:EOS38226.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
uridine phosphorylase
L1_008_000M1_scaffold_231_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3429..3944
DNA (516bp) protein (172aa)
FR47-like protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZV1_9FIRM
FR47-like protein {ECO:0000313|EMBL:CDB27259.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
GNAT family acetyltransferase
L1_008_000M1_scaffold_231_5
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3950..4819
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J4M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS29170.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L1_008_000M1_scaffold_231_6
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4870..6474
DNA (1605bp) protein (535aa)
N-acyl-D-amino-acid deacylase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTZ6_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_52_13
L1_008_000M1_scaffold_231_7
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(6536..7783)
DNA (1248bp) protein (416aa)
Putative transporter n=1 Tax=Firmicutes bacterium CAG:170 PF7_9FIRM">RepID=R6MPF7_9FIRM
Putative transporter {ECO:0000313|EMBL:CDB87692.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative transporter
L1_008_000M1_scaffold_231_8
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

7896..8759
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AAP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40285.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
positive regulator for rhaBAD operon
L1_008_000M1_scaffold_231_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

8756..9607
DNA (852bp) protein (284aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I074_9FIRM
L1_008_000M1_scaffold_231_10
Exiguobacterium sp. MH3, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9612..10163
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Exiguobacterium sp. MH3 RepID=U6BDC6_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHA29896.1}; TaxID=1399115 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. MH3.;"
L1_008_000M1_scaffold_231_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(10257..10448)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82039.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L1_008_000M1_scaffold_231_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(10465..12069)
DNA (1605bp) protein (535aa)
2-hydroxyglutaryl-CoA dehydratase D-component HgdA2 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUX7_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component HgdA2 {ECO:0000313|EMBL:CCX45774.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hgdA2; 2-hydroxyglutaryl-CoA dehydratase subunit D
L1_008_000M1_scaffold_231_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(12062..13267)
DNA (1206bp) protein (402aa)
2-hydroxyglutaryl-CoA dehydratase D-component HgdB2 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DCZ5_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component HgdB2 {ECO:0000313|EMBL:CDA82041.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hgdB2; 2-hydroxyglutaryl-CoA dehydratase subunit D
L1_008_000M1_scaffold_231_14
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(13292..14020)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DCY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82031.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L1_008_000M1_scaffold_231_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(14020..14187)
DNA (168bp) protein (56aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B469BD
Uncharacterized protein {ECO:0000313|EMBL:CDA82030.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L1_008_000M1_scaffold_231_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(14194..15000)
DNA (807bp) protein (269aa)
2-hydroxyglutaryl-CoA dehydratase activator HgdC n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAP1_9FIRM
2-hydroxyglutaryl-CoA dehydratase activator HgdC {ECO:0000313|EMBL:CDA82029.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hgdC; 2-hydroxyglutaryl-CoA dehydratase subunit C
L1_008_000M1_scaffold_231_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(15039..16826)
DNA (1788bp) protein (596aa)
2-hydroxyglutaryl-CoA dehydratase D-component HgdA1 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D044_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component HgdA1 {ECO:0000313|EMBL:CDA82028.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hgdA1; 2-hydroxyglutaryl-CoA dehydratase subunit D
L1_008_000M1_scaffold_231_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(16826..18022)
DNA (1197bp) protein (399aa)
2-hydroxyglutaryl-CoA dehydratase D-component HgdB1 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVR5_9FIRM
2-hydroxyglutaryl-CoA dehydratase D-component HgdB1 {ECO:0000313|EMBL:CDA82027.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hgdB1; 2-hydroxyglutaryl-CoA dehydratase subunit D
L1_008_000M1_scaffold_231_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(18094..18936)
DNA (843bp) protein (281aa)
CO dehydrogenase maturation factor n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DCY6_9FIRM
CO dehydrogenase maturation factor {ECO:0000313|EMBL:CDA82026.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
CO dehydrogenase maturation factor
L1_008_000M1_scaffold_231_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19108..21372
DNA (2265bp) protein (755aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003809B30
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDM97414.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
enoate reductase
L1_008_000M1_scaffold_231_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21468..23420)
DNA (1953bp) protein (651aa)
MATE efflux family protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CXF0_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:ERI71971.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_231_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23606..24853
DNA (1248bp) protein (416aa)
pepP; xaa-pro aminopeptidase (EC:3.4.11.9)
Aminopeptidase P domain protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJW0_9FIRM
Aminopeptidase P domain protein {ECO:0000313|EMBL:CDE51603.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
L1_008_000M1_scaffold_231_23
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24857..25942
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B3Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32970.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
Ethanolamine utilization protein
L1_008_000M1_scaffold_231_24
Paenibacillus sp. KSM-M126, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26027..26677)
DNA (651bp) protein (217aa)
Putative glycosidase n=1 Tax=Paenibacillus sp. KSM-M126 RepID=B1Q2N8_9BACL
glycosyl hydrolase
Putative glycosidase {ECO:0000313|EMBL:BAG15879.1}; TaxID=381424 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. KSM-M126.;"
L1_008_000M1_scaffold_231_25
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26697..27026)
DNA (330bp) protein (110aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Roseburia sp. CAG:471 RepID=R7EHI8_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDE00992.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L1_008_000M1_scaffold_231_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27051..29528)
DNA (2478bp) protein (826aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ65_9FIRM
L1_008_000M1_scaffold_231_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(29549..30097)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ETB8_9FIRM
Riboflavin transporter {ECO:0000256|PIRNR:PIRNR037778}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L1_008_000M1_scaffold_231_28
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

30395..30898
DNA (504bp) protein (168aa)
Protein belonging to Uncharacterized protein family UPF0398 n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CYI4_9FIRM
Protein belonging to Uncharacterized protein family UPF0398 {ECO:0000313|EMBL:CCX71584.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L1_008_000M1_scaffold_231_29
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30909..31361
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y1J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58358.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
spermine/spermidine acetyltransferase
L1_008_000M1_scaffold_231_30
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(31433..31792)
DNA (360bp) protein (120aa)
Nucleoid-associated protein BN515_01758 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MP56_9FIRM
Nucleoid-associated protein BN515_01758 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
Displaying items 1-30 of 68 in total

View Taxonomy