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L1_008_000M1_scaffold_398

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Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_398_1
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(134..1936)
DNA (1803bp) protein (601aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DB66_9FIRM
Oligoendopeptidase F {ECO:0000313|EMBL:CCX73096.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L1_008_000M1_scaffold_398_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(1961..2167)
DNA (207bp) protein (69aa)
UPF0291 protein HMPREF0995_00655 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQD7_9FIRM
UPF0291 protein HMPREF0995_00655 {ECO:0000313|EMBL:CCX45560.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L1_008_000M1_scaffold_398_3
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(2170..2754)
DNA (585bp) protein (195aa)
5'-nucleotidase YfbR (EC:3.1.3.5)
HD domain protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IYR0_9FIRM
HD domain protein {ECO:0000313|EMBL:CDB43117.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L1_008_000M1_scaffold_398_4
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(2748..3785)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CSM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX70838.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L1_008_000M1_scaffold_398_5
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(3786..4772)
DNA (987bp) protein (329aa)
DNA replication protein DnaC n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CWA8_9FIRM
DNA replication protein DnaC {ECO:0000313|EMBL:CCX70839.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L1_008_000M1_scaffold_398_6
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4779..5717)
DNA (939bp) protein (313aa)
DnaD domain protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CSC8_9FIRM
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_398_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

5869..7950
DNA (2082bp) protein (694aa)
Peptidase U32 family n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AS96_9FIRM
Peptidase U32 family {ECO:0000313|EMBL:CCX46265.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
peptidase U32 family protein
L1_008_000M1_scaffold_398_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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7937..8524
DNA (588bp) protein (196aa)
Maf-like protein HMPREF0866_01450 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XED0_9FIRM
Maf-like protein HMPREF0866_01450 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
septum formation protein Maf
L1_008_000M1_scaffold_398_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

8607..9419
DNA (813bp) protein (271aa)
Cell shape-determining protein MreC n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IC15_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
mreC; putative rod shape-determining protein MreC
L1_008_000M1_scaffold_398_10
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9452..9982
DNA (531bp) protein (177aa)
Putative rod shape-determining protein MreD n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATF5_9FIRM
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_398_11
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10017..12107
DNA (2091bp) protein (697aa)
Penicillin-binding protein A n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6HYH0_9FIRM
pbpA; penicillin-binding protein A
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_398_12
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

12202..12600
DNA (399bp) protein (133aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Putative methylglyoxal synthase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D4Q2_9FIRM
Putative methylglyoxal synthase {ECO:0000313|EMBL:CCX70846.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L1_008_000M1_scaffold_398_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12681..14039
DNA (1359bp) protein (453aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Oscillibacter RepID=U2QD22_9FIRM
L1_008_000M1_scaffold_398_14
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14078..15610
DNA (1533bp) protein (511aa)
Mg chelatase-like protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IYA3_9FIRM
putative magnesium chelatase
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_398_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

15607..16251
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S1P6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46953.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L1_008_000M1_scaffold_398_16
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

16259..17431
DNA (1173bp) protein (391aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Probable tRNA sulfurtransferase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6HYI3_9FIRM
thiI; putative thiamine biosynthesis protein ThiI
L1_008_000M1_scaffold_398_17
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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17455..18684
DNA (1230bp) protein (410aa)
Putative competence-damage inducible protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CSN8_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
putative competence-damage inducible protein
L1_008_000M1_scaffold_398_18
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

18706..19260
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I341_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB44548.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
phosphoribosyltransferase
L1_008_000M1_scaffold_398_19
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(19303..19737)
DNA (435bp) protein (145aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
putative deaminase (EC:3.5.4.-)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J2R3_9FIRM
L1_008_000M1_scaffold_398_20
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19763..20326
DNA (564bp) protein (188aa)
Putative manganese efflux pump MntP n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=MNTP_METMA
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_398_21
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20613..21311
DNA (699bp) protein (233aa)
GntR domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CLJ2_DESK7
HTH-type transcriptional regulator LutR {ECO:0000313|EMBL:KJJ72341.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
GntR family transcriptional regulator
L1_008_000M1_scaffold_398_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21387..22517
DNA (1131bp) protein (377aa)
Xaa-Pro dipeptidase {ECO:0000313|EMBL:KJJ72340.1}; EC=3.4.13.9 {ECO:0000313|EMBL:KJJ72340.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Peptidase M24 n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11FP5_MESSB
peptidase M24
L1_008_000M1_scaffold_398_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

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22541..23620
DNA (1080bp) protein (360aa)
NAD/NADP octopine/nopaline dehydrogenase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PJ33_9EURY
glycerol-3-phosphate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
L1_008_000M1_scaffold_398_24
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23644..24810
DNA (1167bp) protein (389aa)
Muconate cycloisomerase 1 {ECO:0000313|EMBL:KJJ72339.1}; EC=5.5.1.1 {ECO:0000313|EMBL:KJJ72339.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
muconate cycloisomerase (EC:5.5.1.1)
Muconate cycloisomerase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARM6_RUBXD
L1_008_000M1_scaffold_398_25
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24937..25572)
DNA (636bp) protein (212aa)
DJ-1/PfpI family protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AHP9_9CLOT
DJ-1/PfpI family protein {ECO:0000313|EMBL:CDA51493.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
glutamine amidotransferase
L1_008_000M1_scaffold_398_26
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(25641..26639)
DNA (999bp) protein (333aa)
phosphotransacetylase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EIW6_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:CCX92605.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L1_008_000M1_scaffold_398_27
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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26777..27067
DNA (291bp) protein (97aa)
Toxin-antitoxin system antitoxin component Xre family n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D309_9FIRM
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CCX71287.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
putative Xre family DNA-binding protein
L1_008_000M1_scaffold_398_28
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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27090..28895
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
Elongation factor 4 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5A3_9FIRM
lepA; GTP-binding protein LepA
L1_008_000M1_scaffold_398_29
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28932..29441
DNA (510bp) protein (170aa)
Acetyltransferase GNAT family n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HML4_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY30883.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
acetyltransferase (GNAT) family protein
L1_008_000M1_scaffold_398_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29484..30005)
DNA (522bp) protein (174aa)
Nitroreductase family protein n=2 Tax=Clostridiales RepID=U2AYI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57364.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
nitroreductase
Displaying items 1-30 of 65 in total

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