ggKbase home page

L1_008_000M1_scaffold_1125_8

Organism: dasL1_008_000M1_metabat_metabat_85_fa_fa

near complete RP 44 / 55 BSCG 46 / 51 MC: 1 ASCG 12 / 38
Location: comp(7069..7338)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNV3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 80.0
  • Bit_score: 131
  • Evalue 4.20e-28
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFB76238.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 80.0
  • Bit_score: 131
  • Evalue 6.00e-28
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 80.0
  • Bit_score: 102
  • Evalue 4.60e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 270
ATGCTCTTCCGTAAAGGGGGCATGTACATGAACATTGGAGAAGCGGTTCGGGTCCGGATCATCGAGCTGTGTGGTCAACGGGACATTTCCATCAATAAACTGTGCAACATGAGCGGCGTCACGCAATCGACCGTCAATAACATCGTCAGCGGGCGCAACAACAGCGCAACGATTTCGACGATCAAAAAGCTATGCGATGGCTTAGGCATCACGATCCAGGATTTTTTTGCGTCAAGCCTGTTTACCGATCTGGAGCAGGAAATTGAGTAA
PROTEIN sequence
Length: 90
MLFRKGGMYMNIGEAVRVRIIELCGQRDISINKLCNMSGVTQSTVNNIVSGRNNSATISTIKKLCDGLGITIQDFFASSLFTDLEQEIE*