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L1_008_000M1_scaffold_1125

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_1125_1
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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269..976
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I4M4_9FIRM
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_1125_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(1010..1603)
DNA (594bp) protein (198aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
pth; Peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B833_9FIRM
L1_008_000M1_scaffold_1125_3
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(1613..2575)
DNA (963bp) protein (321aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
prs; phosphoribosyl pyrophosphate synthetase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CUK5_9FIRM
L1_008_000M1_scaffold_1125_4
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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2764..3879
DNA (1116bp) protein (372aa)
Peptide chain release factor 2 n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IYI8_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
prfB; peptide chain release factor 2
L1_008_000M1_scaffold_1125_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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3944..4861
DNA (918bp) protein (306aa)
CorA-like protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AT76_9FIRM
CorA-like protein {ECO:0000313|EMBL:CCX46183.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Mg2 transporter protein CorA family protein
L1_008_000M1_scaffold_1125_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5269..6327
DNA (1059bp) protein (353aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P8K2_9FIRM
L1_008_000M1_scaffold_1125_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6343..6978
DNA (636bp) protein (212aa)
streptogramin A acetyltransferase (EC:2.3.1.-)
Streptogramin A acetyltransferase n=1 Tax=Clostridium botulinum (strain Loch Maree / Type A3) RepID=B1KTL6_CLOBM
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:KIE46772.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
L1_008_000M1_scaffold_1125_8
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7069..7338)
DNA (270bp) protein (90aa)
DNA-binding helix-turn-helix protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PNV3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFB76238.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
XRE family transcriptional regulator
L1_008_000M1_scaffold_1125_9
unknown

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7447..8595
DNA (1149bp) protein (383aa)

This feature has no annotations

L1_008_000M1_scaffold_1125_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8635..9441
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=2 Tax=root RepID=D4JWV5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97574.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_1125_11
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9683..11566)
DNA (1884bp) protein (628aa)
ABC-type phosphate transport system periplasmic component-like protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KMK3_CLOPH
phosphate ABC transporter periplasmic component-like protein
ABC-type phosphate transport system periplasmic component-like protein {ECO:0000313|EMBL:ABX41448.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_1125_12
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11685..14228)
DNA (2544bp) protein (848aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Blautia sp. CAG:257 RepID=R5WPU2_9FIRM
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:CDA04600.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L1_008_000M1_scaffold_1125_13
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14267..14503)
DNA (237bp) protein (79aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Blautia sp. CAG:52 RepID=R6GIT7_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDD98872.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
hypothetical protein
L1_008_000M1_scaffold_1125_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14718..16043
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BPI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17093.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L1_008_000M1_scaffold_1125_15
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16043..16963
DNA (921bp) protein (307aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Coprococcus catus GD/7 RepID=D4J5J1_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBK79612.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L1_008_000M1_scaffold_1125_16
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17018..17719)
DNA (702bp) protein (234aa)
Putative effector of murein hydrolase n=1 Tax=Clostridium sp. CAG:411 RepID=R7HT46_9CLOT
Putative effector of murein hydrolase {ECO:0000313|EMBL:CDE42153.1}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
LrgB family protein
L1_008_000M1_scaffold_1125_17
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17716..18081)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HC44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE35742.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Putative effector of murein hydrolase LrgA
L1_008_000M1_scaffold_1125_18
Mogibacterium timidum, Mogibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18217..18654
DNA (438bp) protein (146aa)
Transcriptional regulator n=1 Tax=Mogibacterium sp. CM50 RepID=J4W3P8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:EUC57992.1}; TaxID=1401079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis; Mogibacterium.;" source="Mogibacterium timidum ATCC 33093.;"
cysteine desulfurase
L1_008_000M1_scaffold_1125_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18761..19948
DNA (1188bp) protein (396aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJD6_9FIRM
Cysteine desulfurase NifS {ECO:0000313|EMBL:CDB26122.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L1_008_000M1_scaffold_1125_20
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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19969..20403
DNA (435bp) protein (145aa)
Fe-S iron-sulfur cluster assembly protein NifU family n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQ46_9FIRM
Fe-S iron-sulfur cluster assembly protein NifU family {ECO:0000313|EMBL:CDB87937.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L1_008_000M1_scaffold_1125_21
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20459..21106)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Streptococcus henryi RepID=UPI000374EDED
Uncharacterized protein {ECO:0000313|EMBL:CDE28964.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
hypothetical protein
L1_008_000M1_scaffold_1125_22
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

21236..21538
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XFF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA13560.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Uncharacterized protein containing a Zn-finger-like domain
L1_008_000M1_scaffold_1125_23
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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21541..22104
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JP80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32952.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L1_008_000M1_scaffold_1125_24
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(22303..23175)
DNA (873bp) protein (291aa)
Serine acetyltransferase n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F4H8_9THEM
serine acetyltransferase
Serine acetyltransferase {ECO:0000313|EMBL:AFK06831.1}; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
L1_008_000M1_scaffold_1125_25
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23195..24478)
DNA (1284bp) protein (428aa)
Permease of the major facilitator superfamily n=1 Tax=Clostridium sp. CAG:81 RepID=R5FUB7_9CLOT
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CCY08675.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
major facilitator superfamily protein
L1_008_000M1_scaffold_1125_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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24747..26057
DNA (1311bp) protein (437aa)
Permease, cytosine/purine, uracil, thiamine, allantoin family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGS9_9FIRM
Permease, cytosine/purine, uracil, thiamine, allantoin family {ECO:0000313|EMBL:EDS09177.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Permease for cytosine/purines uracil thiamine allantoin
L1_008_000M1_scaffold_1125_27
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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26180..27664
DNA (1485bp) protein (495aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000313|EMBL:CCP25131.1}; EC=1.4.3.16 {ECO:0000313|EMBL:CCP25131.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L-aspartate oxidase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LUP2_TEPAE
L1_008_000M1_scaffold_1125_28
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(27919..30240)
DNA (2322bp) protein (774aa)
Clp protease ATP-binding subunit ClpC n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I972_9FIRM
Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:CDB42999.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
L1_008_000M1_scaffold_1125_29
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30271..30990)
DNA (720bp) protein (240aa)
Putative CvpA family protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXZ0_9FIRM
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_1125_30
unknown

Not on your lists

comp(31027..32142)
DNA (1116bp) protein (372aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

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