ggKbase home page

L1_008_030G1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 85 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_45_1
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

254..604
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XC13_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50363.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L1_008_030G1_scaffold_45_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

601..2028
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IB38_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47483.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L1_008_030G1_scaffold_45_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2169..3194
DNA (1026bp) protein (342aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=R9HGG9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02886.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L1_008_030G1_scaffold_45_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3393..4787
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=R9HFU6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02887.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
putative mobilization protein
L1_008_030G1_scaffold_45_5
Prevotella intermedia, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4962..5384
DNA (423bp) protein (141aa)
Transcription termination/antitermination factor NusG n=1 Tax=Prevotella sp. CAG:520 RepID=R6F8X1_9BACT
Transcription termination {ECO:0000313|EMBL:KJJ88161.1}; TaxID=1347790 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella intermedia ZT.;"
L1_008_030G1_scaffold_45_6
Prevotella bryantii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5493..12722
DNA (7230bp) protein (2410aa)
Putative uncharacterized protein id=3452115 bin=GWF2_Bacteroidetes_33_16 species=Prevotella multisaccharivorax genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:EFI72394.1}; TaxID=752555 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella bryantii B14.;"
hypothetical protein
L1_008_030G1_scaffold_45_7
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12935..15007
DNA (2073bp) protein (691aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M8U9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGM98301.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L1_008_030G1_scaffold_45_8
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15015..16700
DNA (1686bp) protein (562aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Divergent AAA domain protein n=2 Tax=Bacteroidales RepID=B0MTM4_9BACT
Divergent AAA domain protein {ECO:0000313|EMBL:EDS04261.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
L1_008_030G1_scaffold_45_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16933..17220
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=R9HFV0_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS02892.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Helix-turn-helix.
L1_008_030G1_scaffold_45_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17231..20071
DNA (2841bp) protein (947aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=R9HFQ5_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EOS12983.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
type III restriction protein res subunit
L1_008_030G1_scaffold_45_11
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20471..21598
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6DLF4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA85121.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
beta-hexosaminidase
L1_008_030G1_scaffold_45_12
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21758..22708)
DNA (951bp) protein (317aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=3 Tax=Bacteroides RepID=A5ZGB8_9BACE
L1_008_030G1_scaffold_45_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22748..23395)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EQD5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22549.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_45_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23415..25913)
DNA (2499bp) protein (833aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q138_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22548.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L1_008_030G1_scaffold_45_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26038..26703
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21225.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_45_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26706..27350
DNA (645bp) protein (215aa)
3'-5' exonuclease {ECO:0000313|EMBL:EDM21224.1}; EC=3.6.1.- {ECO:0000313|EMBL:EDM21224.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
3'-5' exonuclease n=3 Tax=Bacteroides RepID=A5ZGB4_9BACE
hypothetical protein
L1_008_030G1_scaffold_45_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27357..28535
DNA (1179bp) protein (393aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZGB3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72627.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_030G1_scaffold_45_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28942..30192
DNA (1251bp) protein (417aa)
Nucleoside transporter n=3 Tax=Bacteroides RepID=A5ZGB1_9BACE
Nucleoside transporter {ECO:0000313|EMBL:EIY22544.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
xanthosine permease
L1_008_030G1_scaffold_45_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30203..30805
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22543.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_45_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30813..31514
DNA (702bp) protein (234aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Ribosomal RNA small subunit methyltransferase E n=3 Tax=root RepID=A5ZGA9_9BACE
16S ribosomal RNA methyltransferase RsmE
L1_008_030G1_scaffold_45_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31560..33107
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGA8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21218.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_45_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33124..33768
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V7X2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22540.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
ABC transporter ATP-binding protein
L1_008_030G1_scaffold_45_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33822..35027
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZGA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22539.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_45_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35049..37697
DNA (2649bp) protein (883aa)
TonB-dependent receptor plug domain protein n=2 Tax=Bacteroides caccae RepID=A5ZGA5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22538.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
TonB-dependent Receptor Plug Domain.
L1_008_030G1_scaffold_45_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37813..41853
DNA (4041bp) protein (1347aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UAI1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72619.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
histidine kinase
L1_008_030G1_scaffold_45_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42013..43311
DNA (1299bp) protein (433aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDM21213.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDM21213.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Glycosyl hydrolase, family 88 n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGA3_9BACE
glycosyl hydrolase family 88
L1_008_030G1_scaffold_45_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43314..44534
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UV58_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ72617.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_030G1_scaffold_45_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44786..46144
DNA (1359bp) protein (453aa)
IPT/TIG domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGA0_9BACE
IPT/TIG domain protein {ECO:0000313|EMBL:EDM21210.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
IPT/TIG domain.
L1_008_030G1_scaffold_45_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46172..49282
DNA (3111bp) protein (1037aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZG99_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM21209.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Outer membrane receptor for ferrienterochelin and colicins
L1_008_030G1_scaffold_45_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

49299..51320
DNA (2022bp) protein (674aa)
SusD family protein n=2 Tax=Bacteroides RepID=A5ZG98_9BACE
SusD family protein {ECO:0000313|EMBL:EDM21208.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
SusD family.
Displaying items 1-30 of 85 in total

View Taxonomy