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L1_008_030G1_scaffold_64

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_64_1
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(308..1750)
DNA (1443bp) protein (481aa)
FtsK n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GLQ1_9BIFI
FtsK {ECO:0000313|EMBL:CDB22549.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
FtsK/SpoIIIE family protein
L1_008_030G1_scaffold_64_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1923..2063)
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GAW1_9BIFI
Bifidobacterium kashiwanohense JCM 15439 = DSM 21854 DNA, complete genome {ECO:0000313|EMBL:BAQ28147.1}; Uncharacterized protein {ECO:0000313|EMBL:KFI63798.1}; TaxID=1150460 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense JCM 15439 = DSM 21854.;"
L1_008_030G1_scaffold_64_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2069..2443)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H8J9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDB22547.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
hypothetical protein
L1_008_030G1_scaffold_64_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3011..4054
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6W4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41479.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
colicin uptake membrane protein
L1_008_030G1_scaffold_64_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4051..4299)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q6W3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM41478.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_030G1_scaffold_64_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4767..5171
DNA (405bp) protein (135aa)
Pyridoxamine 5'-phosphate oxidase family protein n=2 Tax=Bifidobacterium dentium RepID=B1S9X0_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27166.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_030G1_scaffold_64_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5248..6027)
DNA (780bp) protein (260aa)
virR; two-component response regulator virR (EC:3.1.1.61)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q657_9BIFI
Response regulator receiver domain protein {ECO:0000313|EMBL:EFM42131.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_030G1_scaffold_64_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6024..7295)
DNA (1272bp) protein (424aa)
HIT family hydrolase (EC:2.7.13.3)
Histidine kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q658_9BIFI
Histidine kinase {ECO:0000313|EMBL:ETO96319.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_030G1_scaffold_64_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7531..9201
DNA (1671bp) protein (557aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q659_9BIFI
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EFM42133.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
cell surface protein
L1_008_030G1_scaffold_64_10
unknown

Not on your lists

comp(9268..9708)
DNA (441bp) protein (147aa)

This feature has no annotations

L1_008_030G1_scaffold_64_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10106..10933
DNA (828bp) protein (276aa)
phosphoglycerate mutase family protein (EC:3.1.3.73)
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ADB09849.1}; EC=3.1.3.73 {ECO:0000313|EMBL:ADB09849.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Phosphoglycerate mutase family protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N839_9BIFI
L1_008_030G1_scaffold_64_12
unknown

Not on your lists

11044..11166
DNA (123bp) protein (41aa)

This feature has no annotations

L1_008_030G1_scaffold_64_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11141..12091
DNA (951bp) protein (317aa)
CorA-like protein n=3 Tax=Bifidobacterium dentium RepID=B1S9X6_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27160.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
magnesium transporter
L1_008_030G1_scaffold_64_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12155..13000
DNA (846bp) protein (282aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9X7_9BIFI
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:ETO96259.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
ABC transporter substrate-binding protein
L1_008_030G1_scaffold_64_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13073..16045
DNA (2973bp) protein (991aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=2 Tax=Bifidobacterium dentium RepID=E0Q663_9BIFI
L1_008_030G1_scaffold_64_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16477..16872
DNA (396bp) protein (132aa)
ComEA protein n=2 Tax=Bifidobacterium dentium RepID=E0Q664_9BIFI
ComEA protein {ECO:0000313|EMBL:EFM42138.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
COME operon protein 1
L1_008_030G1_scaffold_64_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16869..18590
DNA (1722bp) protein (574aa)
ComEC/Rec2-like protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9Y2_9BIFI
ComEC/Rec2-like protein {ECO:0000313|EMBL:EFM42139.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
COME operon protein 3
L1_008_030G1_scaffold_64_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18590..19618
DNA (1029bp) protein (343aa)
DNA polymerase III, delta subunit n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q666_9BIFI
Putative DNA polymerase III, delta subunit {ECO:0000313|EMBL:ETO96137.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DNA polymerase III, subunit delta
L1_008_030G1_scaffold_64_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19615..20190
DNA (576bp) protein (192aa)
Hydrolase, P-loop family n=2 Tax=Bifidobacterium dentium RepID=E0Q667_9BIFI
Hydrolase, P-loop family {ECO:0000313|EMBL:EFM42141.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ABC transporter ATP-binding protein
L1_008_030G1_scaffold_64_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20260..21027
DNA (768bp) protein (256aa)
glycoprotease protein family (EC:3.4.24.57)
Glycoprotease protein family {ECO:0000313|EMBL:ADB09841.1}; EC=3.4.24.57 {ECO:0000313|EMBL:ADB09841.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
Glycoprotease protein family n=2 Tax=Bifidobacterium dentium RepID=D2QAK5_BIFDB
L1_008_030G1_scaffold_64_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21038..21535
DNA (498bp) protein (166aa)
rimI; ribosomal-protein-S18-alanine acetyltransferase (EC:2.3.1.88)
RimI Ribosomal-protein-S18-alanine acetyltransferase {ECO:0000313|EMBL:ADB09840.1}; EC=2.3.1.88 {ECO:0000313|EMBL:ADB09840.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
RimI Ribosomal-protein-S18-alanine acetyltransferase n=4 Tax=Bifidobacterium dentium RepID=D2QAK4_BIFDB
L1_008_030G1_scaffold_64_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


21551..22594
DNA (1044bp) protein (348aa)
gpc; O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
tRNA N6-adenosine threonylcarbamoyltransferase n=4 Tax=Bifidobacterium dentium RepID=D2QAK3_BIFDB
L1_008_030G1_scaffold_64_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22766..23143)
DNA (378bp) protein (126aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S9Y8_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETO96332.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_030G1_scaffold_64_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23245..23898
DNA (654bp) protein (218aa)
Peptidase, M23 family n=2 Tax=Bifidobacterium dentium RepID=E0Q672_9BIFI
Peptidase, M23 family {ECO:0000313|EMBL:EFM42146.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_64_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24000..25811
DNA (1812bp) protein (604aa)
fadD1; long-chain-fatty-acid--CoA ligase (EC:1.13.12.7)
AMP-binding enzyme n=2 Tax=Bifidobacterium dentium RepID=E0Q673_9BIFI
AMP-binding enzyme {ECO:0000313|EMBL:EFM42147.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_030G1_scaffold_64_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25899..27428)
DNA (1530bp) protein (510aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q674_9BIFI
Periplasmic-binding protein domain protein {ECO:0000313|EMBL:ETO96253.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_030G1_scaffold_64_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27570..28790)
DNA (1221bp) protein (407aa)
icdA; isocitrate dehydrogenase [NADP] (EC:1.1.1.85)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
Isocitrate dehydrogenase [NADP] n=4 Tax=Bifidobacterium dentium RepID=D2QAJ8_BIFDB
L1_008_030G1_scaffold_64_28
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28888..30051
DNA (1164bp) protein (388aa)
guaC; GMP reductase,fadD1 Long-chain-fatty-acid--CoA ligase (EC:1.1.1.205)
IMP dehydrogenase family protein n=2 Tax=Bifidobacterium dentium RepID=E1N822_9BIFI
IMP dehydrogenase family protein {ECO:0000313|EMBL:ETO96122.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_030G1_scaffold_64_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30187..30816
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q677_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO96127.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_030G1_scaffold_64_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30932..32980
DNA (2049bp) protein (683aa)
fadH3; long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-binding enzyme n=2 Tax=Bifidobacterium dentium RepID=E0Q678_9BIFI
AMP-binding enzyme {ECO:0000313|EMBL:EFM42152.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Displaying items 1-30 of 93 in total

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