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L1_008_030G1_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_67_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(383..2041)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NBM5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42530.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
DNA polymerase III
L1_008_030G1_scaffold_67_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2221..3651
DNA (1431bp) protein (477aa)
gadB; glutamate decarboxylase (EC:4.1.1.15)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
GadB glutamate decarboxylase n=4 Tax=Bifidobacterium dentium RepID=D2Q5X3_BIFDB
L1_008_030G1_scaffold_67_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4013..5425
DNA (1413bp) protein (471aa)
Glutamate:g-aminobutyrate antiporter n=2 Tax=Bifidobacterium dentium RepID=D2Q5X4_BIFDB
glutamate:g-aminobutyrate antiporter
Glutamate:g-aminobutyrate antiporter {ECO:0000313|EMBL:ADB10339.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_030G1_scaffold_67_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5519..6175)
DNA (657bp) protein (219aa)
N-formylmethionyl-tRNA deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
Peptide deformylase n=2 Tax=Bifidobacterium dentium RepID=E0Q4X4_9BIFI
L1_008_030G1_scaffold_67_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6294..7676)
DNA (1383bp) protein (461aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Bifidobacterium dentium RepID=E0Q4X3_9BIFI
L1_008_030G1_scaffold_67_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7830..10439)
DNA (2610bp) protein (870aa)
pepN; PepN aminopeptidase N (EC:3.4.11.1)
PepN aminopeptidase N n=2 Tax=Bifidobacterium dentium RepID=D2Q5X7_BIFDB
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ27655.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_030G1_scaffold_67_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10569..12509)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4X1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42524.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_67_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12630..13475)
DNA (846bp) protein (282aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
4-hydroxy-tetrahydrodipicolinate synthase n=3 Tax=Bifidobacterium dentium RepID=D2Q5X9_BIFDB
L1_008_030G1_scaffold_67_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13645..16839)
DNA (3195bp) protein (1065aa)
Beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4W8_9BIFI
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EFM42521.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_030G1_scaffold_67_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16868..17491)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4W7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42520.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_67_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17491..19026)
DNA (1536bp) protein (512aa)
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EFM42519.1}; EC=3.2.1.55 {ECO:0000313|EMBL:EFM42519.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Glycosyl hydrolase, family 43 n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NBN6_9BIFI
beta-xylosidase
L1_008_030G1_scaffold_67_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19168..20595)
DNA (1428bp) protein (476aa)
Sensor histidine kinase VirS domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4W5_9BIFI
Sensor histidine kinase VirS domain protein {ECO:0000313|EMBL:EFM42518.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_67_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20630..21349)
DNA (720bp) protein (240aa)
LytTr DNA-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4W4_9BIFI
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFM42517.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Response regulator of the LytR/AlgR family
L1_008_030G1_scaffold_67_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21417..22652)
DNA (1236bp) protein (412aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4W3_9BIFI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFM42516.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
MFS superfamily transporter (cyanate transporter CynX-like protein)
L1_008_030G1_scaffold_67_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22728..22886
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q4W2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42515.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_67_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22922..25828)
DNA (2907bp) protein (969aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ETO95500.1}; EC=3.6.3.- {ECO:0000313|EMBL:ETO95500.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
actP; copper transport P-type ATPase ActP (EC:3.6.3.12)
Copper-exporting ATPase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q4W1_9BIFI
L1_008_030G1_scaffold_67_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25971..26264
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S571_9BIFI
hypothetical protein
Metal-sensitive transcriptional repressor {ECO:0000313|EMBL:ETO95502.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_030G1_scaffold_67_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26427..27404)
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S569_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB10349.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_030G1_scaffold_67_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27768..28520)
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Bifidobacterium dentium RepID=E0Q4V8_9BIFI
L1_008_030G1_scaffold_67_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28732..30081)
DNA (1350bp) protein (450aa)
MFS superfamily transporter n=2 Tax=Bifidobacterium dentium RepID=D2Q5Y6_BIFDB
MFS superfamily transporter
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO95529.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_030G1_scaffold_67_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30078..30785)
DNA (708bp) protein (236aa)
Acetyltransferase, GNAT family n=2 Tax=Bifidobacterium dentium RepID=E0Q4V5_9BIFI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFM42508.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_67_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30943..34983)
DNA (4041bp) protein (1347aa)
ATP-dependent DNA helicase (EC:3.1.11.5)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
UvrD/REP helicase n=2 Tax=Bifidobacterium dentium RepID=E0Q4V4_9BIFI
L1_008_030G1_scaffold_67_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34980..39044)
DNA (4065bp) protein (1355aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4V3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42506.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ATP-dependent DNA helicase
L1_008_030G1_scaffold_67_24
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39210..40604)
DNA (1395bp) protein (465aa)
MATE efflux family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4V2_9BIFI
MATE efflux family protein {ECO:0000313|EMBL:EFM42505.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
MATE efflux family protein
L1_008_030G1_scaffold_67_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40640..41014)
DNA (375bp) protein (125aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4V1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42504.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_67_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41011..41478)
DNA (468bp) protein (156aa)
Nucleotidyltransferase domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4V0_9BIFI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ETO95587.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
nucleotidyltransferase family protein
L1_008_030G1_scaffold_67_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41993..43405
DNA (1413bp) protein (471aa)
serine/threonine protein kinase (EC:2.7.12.2)
Kinase domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4U8_9BIFI
Kinase domain protein {ECO:0000313|EMBL:EFM42501.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_030G1_scaffold_67_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43454..49555
DNA (6102bp) protein (2034aa)
fibronectin type III domain-containing protein (EC:3.2.1.14)
Fibronectin type III domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4U7_9BIFI
Fibronectin type III domain protein {ECO:0000313|EMBL:EFM42500.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_030G1_scaffold_67_29
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

49566..50888
DNA (1323bp) protein (441aa)
ATPase family associated with various cellular activities (AAA) n=2 Tax=Bifidobacterium dentium RepID=E0Q4U6_9BIFI
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EFM42499.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ATPase
L1_008_030G1_scaffold_67_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50902..52122
DNA (1221bp) protein (407aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4U5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM42498.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
Displaying items 1-30 of 100 in total

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