ggKbase home page

L1_008_030G1_scaffold_81

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_81_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(269..1099)
DNA (831bp) protein (277aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Bacteroides RepID=I9PZ52_9BACE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L1_008_030G1_scaffold_81_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1287..2855
DNA (1569bp) protein (523aa)
primary replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ENG3_9BACE
Replicative DNA helicase {ECO:0000313|EMBL:EIY21794.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_030G1_scaffold_81_3
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


3174..5636
DNA (2463bp) protein (821aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=2 Tax=Bacteroides RepID=A5ZDC9_9BACE
L1_008_030G1_scaffold_81_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5668..6408
DNA (741bp) protein (247aa)
Probable transcriptional regulatory protein BACCAC_00884 n=3 Tax=Bacteroides RepID=A5ZDC8_9BACE
Probable transcriptional regulatory protein BN535_02728 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_030G1_scaffold_81_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6416..6661
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZDC7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22496.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_81_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6860..8113
DNA (1254bp) protein (418aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=2 Tax=Bacteroides caccae RepID=A5ZDC6_9BACE
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:EDM22495.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Mn2+ and Fe2+ transporters of the NRAMP family
L1_008_030G1_scaffold_81_7
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8139..8912
DNA (774bp) protein (258aa)
exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III (Xth) n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ENG7_9BACE
Exodeoxyribonuclease III (Xth) {ECO:0000313|EMBL:EIY21799.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_030G1_scaffold_81_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8916..9377
DNA (462bp) protein (154aa)
Oxidoreductase n=2 Tax=Bacteroides caccae RepID=A5ZDC4_9BACE
Oxidoreductase {ECO:0000313|EMBL:EDM22493.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_81_9
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9531..9731
DNA (201bp) protein (67aa)
Uncharacterized protein n=22 Tax=Bacteroides RepID=A5ZDC3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY68486.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L1_008_030G1_scaffold_81_10
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9859..11640
DNA (1782bp) protein (594aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Elongation factor 4 n=3 Tax=Bacteroides RepID=A5ZDC2_9BACE
GTP-binding protein LepA
L1_008_030G1_scaffold_81_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11783..12961
DNA (1179bp) protein (393aa)
Transporter, CPA2 family n=2 Tax=Bacteroides caccae RepID=A5ZDC1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21803.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
transporter, CPA2 family (2.A.37)
L1_008_030G1_scaffold_81_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13158..13526
DNA (369bp) protein (123aa)
Transcriptional regulator, BlaI/MecI/CopY family n=3 Tax=Bacteroides RepID=A5ZDC0_9BACE
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EDM22489.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator
L1_008_030G1_scaffold_81_13
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13579..15252
DNA (1674bp) protein (558aa)
Peptidase M56 family n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UBT0_9BACE
Peptidase M56 family {ECO:0000313|EMBL:CCZ73044.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
transcriptional regulator
L1_008_030G1_scaffold_81_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15546..16778)
DNA (1233bp) protein (411aa)
RmuC domain protein n=2 Tax=Bacteroides caccae RepID=A5ZDB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21806.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_81_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16779..17633)
DNA (855bp) protein (285aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=2 Tax=Bacteroides RepID=A5ZDB7_9BACE
L1_008_030G1_scaffold_81_16
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17732..19366)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PZ66_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21808.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Fe-S oxidoreductase
L1_008_030G1_scaffold_81_17
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19479..19877
DNA (399bp) protein (133aa)
Uncharacterized protein n=4 Tax=root RepID=A5ZDB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73048.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_030G1_scaffold_81_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19958..20878)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Pseudouridine synthase n=3 Tax=Bacteroides RepID=A5ZDB4_9BACE
RNA pseudouridylate synthase
L1_008_030G1_scaffold_81_19
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20913..22301)
DNA (1389bp) protein (463aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Bacteroides RepID=R5U4X0_9BACE
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCZ73050.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
RNA methyltransferase
L1_008_030G1_scaffold_81_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22531..25251
DNA (2721bp) protein (907aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EDM22481.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EDM22481.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=2 Tax=Bacteroides RepID=A5ZDB2_9BACE
L1_008_030G1_scaffold_81_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25496..26011
DNA (516bp) protein (172aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZDB1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22480.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_81_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26098..26202
DNA (105bp) protein (35aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9ENN7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73114.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_030G1_scaffold_81_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26207..26770
DNA (564bp) protein (188aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZDB0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22479.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_81_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26867..27475)
DNA (609bp) protein (203aa)
Thiamine monophosphate synthase/TENI n=3 Tax=Bacteroides RepID=A5ZDA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21881.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
thiamine phosphate pyrophosphorylase
L1_008_030G1_scaffold_81_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27538..28230)
DNA (693bp) protein (231aa)
ThiF family protein n=3 Tax=Bacteroides RepID=A5ZDA8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21882.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
molybdopterin biosynthesis protein
L1_008_030G1_scaffold_81_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28237..29361)
DNA (1125bp) protein (375aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZDA7_9BACE
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDM22476.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
tyrosine lyase ThiH
L1_008_030G1_scaffold_81_27
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29372..31060)
DNA (1689bp) protein (563aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Phosphomethylpyrimidine synthase n=2 Tax=Bacteroides RepID=A5ZDA6_9BACE
hydroxymethylpyrimidine synthase
L1_008_030G1_scaffold_81_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31111..31887)
DNA (777bp) protein (259aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
Thiazole synthase n=2 Tax=Bacteroides RepID=I8V609_9BACE
thiazole-phosphate synthase
L1_008_030G1_scaffold_81_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31898..32515)
DNA (618bp) protein (206aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PYR0_9BACE
L1_008_030G1_scaffold_81_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32520..32720)
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=3 Tax=Bacteroides RepID=A5ZDA3_9BACE
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EIY21887.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
sulfur carrier protein ThiS
Displaying items 1-30 of 64 in total

View Taxonomy