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L1_008_030G1_scaffold_100

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_100_1
unknown

Not on your lists

2..205
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S9G4_9BIFI
L1_008_030G1_scaffold_100_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(422..3328)
DNA (2907bp) protein (969aa)
Glycosyl hydrolase family 3 N-terminal domain protein {ECO:0000313|EMBL:EFM40927.1}; EC=3.2.1.21 {ECO:0000313|EMBL:EFM40927.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
bgl5; beta-glucosidase (EC:3.2.1.52)
Glycosyl hydrolase family 3 N-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9K4_9BIFI
L1_008_030G1_scaffold_100_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3600..5612
DNA (2013bp) protein (671aa)
serine/threonine protein kinase (EC:2.7.11.17)
Kinase domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9K3_9BIFI
Kinase domain protein {ECO:0000313|EMBL:EFM40926.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_030G1_scaffold_100_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5750..6730
DNA (981bp) protein (327aa)
protein-disulfide isomerase (EC:2.7.11.1)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9K2_9BIFI
Thioredoxin {ECO:0000313|EMBL:ETO94966.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_030G1_scaffold_100_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7227..8633
DNA (1407bp) protein (469aa)
G5 domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9K1_9BIFI
G5 domain protein {ECO:0000313|EMBL:EFM40924.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_100_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


8633..9583
DNA (951bp) protein (317aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Bifidobacterium dentium RepID=E0Q9K0_9BIFI
ksgA; dimethyladenosine transferase
L1_008_030G1_scaffold_100_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9580..10479
DNA (900bp) protein (300aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
spE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q9J9_9BIFI
L1_008_030G1_scaffold_100_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10524..11162
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO94979.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
L1_008_030G1_scaffold_100_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11225..12814)
DNA (1590bp) protein (530aa)
CCA tRNA nucleotidyltransferase {ECO:0000313|EMBL:ETO95011.1}; EC=2.7.7.72 {ECO:0000313|EMBL:ETO95011.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
tRNA adenylyltransferase n=2 Tax=Bifidobacterium dentium RepID=E1NAZ7_9BIFI
RNA nucleotidyltransferase
L1_008_030G1_scaffold_100_10
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12892..13587
DNA (696bp) protein (232aa)
phosphohydrolase (EC:3.6.1.13)
Phosphohydrolase (MutT/nudix family protein) n=4 Tax=Bifidobacterium dentium RepID=D2Q815_BIFDB
Phosphohydrolase {ECO:0000313|EMBL:ETY70448.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
L1_008_030G1_scaffold_100_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13551..15692
DNA (2142bp) protein (714aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40918.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_100_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15689..19405
DNA (3717bp) protein (1239aa)
Integral membrane protein MviN n=2 Tax=Bifidobacterium dentium RepID=E0Q9J4_9BIFI
Putative murein biosynthesis integral membrane protein MurJ {ECO:0000313|EMBL:ETO94969.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
mviN; integral membrane protein MviN
L1_008_030G1_scaffold_100_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19551..21284
DNA (1734bp) protein (578aa)
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein {ECO:0000313|EMBL:EFM40916.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFM40916.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
ilvB; acetolactate synthase large subunit (EC:1.2.3.3)
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J3_9BIFI
L1_008_030G1_scaffold_100_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21465..22397
DNA (933bp) protein (311aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
trxB2; trxB2 Thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase n=2 Tax=Bifidobacterium dentium RepID=E0Q9J2_9BIFI
L1_008_030G1_scaffold_100_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22591..23898)
DNA (1308bp) protein (436aa)
ParB-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J1_9BIFI
ParB-like protein {ECO:0000313|EMBL:EFM40914.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
parB; chromosome partitioning protein ParB
L1_008_030G1_scaffold_100_16
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23901..24881)
DNA (981bp) protein (327aa)
parA; chromosome partitioning protein PrA (EC:1.18.6.1)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9J0_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28130.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_030G1_scaffold_100_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25114..25863)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Bifidobacterium dentium RepID=E0Q9I9_9BIFI
gidB; methyltransferase gidB (Glucose inhibited division protein B)
L1_008_030G1_scaffold_100_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26061..26606)
DNA (546bp) protein (182aa)
Jag protein n=2 Tax=Bifidobacterium dentium RepID=D2Q823_BIFDB
jag; Jag protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28132.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
L1_008_030G1_scaffold_100_19
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26726..27736)
DNA (1011bp) protein (337aa)
Membrane protein insertase, YidC/Oxa1 family n=2 Tax=Bifidobacterium dentium RepID=E0Q9I7_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ28133.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium JCM 1195 = DSM 20436.;"
yidC; YidC Inner membrane protein (Preprotein translocase subunit YidC)
L1_008_030G1_scaffold_100_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(28439..28573)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=3 Tax=Bifidobacterium dentium RepID=D2Q826_BIFDB
rpmH; 50S ribosomal protein L34P
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|RuleBase:RU000566}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
L1_008_030G1_scaffold_100_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28889..30391
DNA (1503bp) protein (501aa)
Chromosomal replication initiator protein DnaA n=3 Tax=Bifidobacterium dentium RepID=B1S8M2_9BIFI
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
dnaA; chromosomal replication initiator protein DnaA
L1_008_030G1_scaffold_100_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30866..31990
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DNA polymerase III, subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=2 Tax=Bifidobacterium dentium RepID=E0Q9I3_9BIFI
L1_008_030G1_scaffold_100_23
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32076..33266
DNA (1191bp) protein (397aa)
DNA replication and repair protein RecF n=2 Tax=Bifidobacterium dentium RepID=E0Q9I2_9BIFI
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
recF; Recombinational DNA repair ATPase RecF
L1_008_030G1_scaffold_100_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33266..33751
DNA (486bp) protein (162aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S8L9_9BIFI
hypothetical protein
PF05258 family protein {ECO:0000313|EMBL:ETO94984.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
L1_008_030G1_scaffold_100_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33983..36079
DNA (2097bp) protein (699aa)
DNA gyrase subunit B {ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|RuleBase:RU003363};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
gyrB; DNA gyrase (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NB15_9BIFI
L1_008_030G1_scaffold_100_26
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


36105..38774
DNA (2670bp) protein (890aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
DNA gyrase subunit A n=4 Tax=Bifidobacterium dentium RepID=D2Q6I3_BIFDB
L1_008_030G1_scaffold_100_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38837..39388
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9H8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40901.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
L1_008_030G1_scaffold_100_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39704..41050)
DNA (1347bp) protein (449aa)
glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=E0Q9H7_9BIFI
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
L1_008_030G1_scaffold_100_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41344..42330
DNA (987bp) protein (329aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q9H6_9BIFI
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO94983.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
LacI family transcriptional regulator
L1_008_030G1_scaffold_100_30
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42520..43845
DNA (1326bp) protein (442aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9H5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EFM40898.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
hypothetical protein
Displaying items 1-30 of 47 in total

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