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L1_008_030G1_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_030G1_scaffold_110_1
unknown

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comp(1359..2114)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI00036AB7FB
L1_008_030G1_scaffold_110_2
Proteus vulgaris, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2118..4100)
DNA (1983bp) protein (661aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI00036E57DC
Uncharacterized protein {ECO:0000313|EMBL:KGA59332.1}; TaxID=585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus vulgaris.;"
putative ATP-dependent helicase
L1_008_030G1_scaffold_110_3
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4608..4808)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6MBS0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83437.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
L1_008_030G1_scaffold_110_4
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4921..5427
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6LMK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83436.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
L1_008_030G1_scaffold_110_5
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5429..6142
DNA (714bp) protein (238aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6LCC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83435.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L1_008_030G1_scaffold_110_6
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6360..7613)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LIR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83434.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
L1_008_030G1_scaffold_110_7
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7689..7844)
DNA (156bp) protein (52aa)
Conjugative transposon TraN protein n=1 Tax=Bacteroides clarus CAG:160 RepID=R6LJ89_9BACE
Conjugative transposon TraN protein {ECO:0000313|EMBL:CDB83604.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
L1_008_030G1_scaffold_110_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8498..9118)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=3 Tax=Bacteroides RepID=A5ZGV4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22858.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative TetR-family transcriptional regulator
L1_008_030G1_scaffold_110_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9450..10367
DNA (918bp) protein (306aa)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Ribosomal RNA large subunit methyltransferase F n=2 Tax=Bacteroides caccae RepID=A5ZGV5_9BACE
SAM-dependent methyltransferase
L1_008_030G1_scaffold_110_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10925..12703
DNA (1779bp) protein (593aa)
Transcriptional regulator, AraC family n=2 Tax=Bacteroides caccae RepID=A5ZGV7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22861.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
AraC-type DNA-binding domain-containing proteins
L1_008_030G1_scaffold_110_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12783..13145
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGV8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20667.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_110_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13230..14462
DNA (1233bp) protein (411aa)
Cof-like hydrolase n=3 Tax=Bacteroides RepID=A5ZGV9_9BACE
Cof-like hydrolase {ECO:0000313|EMBL:EIY22863.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
uncharacterized domain 1
L1_008_030G1_scaffold_110_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14483..15577
DNA (1095bp) protein (365aa)
isochorismate synthases (EC:5.4.4.2)
Isochorismate synthase n=2 Tax=Bacteroides caccae RepID=I9ERB6_9BACE
Isochorismate synthase {ECO:0000313|EMBL:EIY22864.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_030G1_scaffold_110_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15607..17274
DNA (1668bp) protein (556aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056850};; Menaquinone biosynthesis protein MenD {ECO:0000256|HAMAP-Rule:MF_01659}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase (EC:2.2.1.9 2.5.1.64)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8V8X1_9BACE
L1_008_030G1_scaffold_110_15
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17278..18102
DNA (825bp) protein (275aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
1,4-Dihydroxy-2-naphthoate synthase (EC:4.1.3.36)
Naphthoate synthase n=3 Tax=Bacteroides RepID=A5ZGW2_9BACE
L1_008_030G1_scaffold_110_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18111..19145
DNA (1035bp) protein (345aa)
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily (EC:4.2.1.113)
O-succinylbenzoate synthase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VC34_9BACE
O-succinylbenzoate synthase {ECO:0000313|EMBL:CCZ75053.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L1_008_030G1_scaffold_110_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19155..20267
DNA (1113bp) protein (371aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.26)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9Q1Z0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22868.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L1_008_030G1_scaffold_110_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20871..21347)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ERB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY22869.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
DNA-binding ferritin-like protein (oxidative damage protectant)
L1_008_030G1_scaffold_110_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21484..22410
DNA (927bp) protein (309aa)
LysR substrate binding domain protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGW6_9BACE
LysR substrate binding domain protein {ECO:0000313|EMBL:EDM20675.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Transcriptional regulator
L1_008_030G1_scaffold_110_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22457..23482)
DNA (1026bp) protein (342aa)
Putative membrane protein n=1 Tax=Bacteroides caccae CAG:21 RepID=R5UH86_9BACE
Putative membrane protein {ECO:0000313|EMBL:EDM20676.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L1_008_030G1_scaffold_110_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23496..24176
DNA (681bp) protein (227aa)
MIP family channel protein n=3 Tax=Bacteroides RepID=A5ZGW8_9BACE
MIP family channel protein {ECO:0000313|EMBL:EDM20677.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
MIP family channel proteins
L1_008_030G1_scaffold_110_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24288..25010)
DNA (723bp) protein (241aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8V7T9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75047.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L1_008_030G1_scaffold_110_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25187..25735
DNA (549bp) protein (183aa)
Sigma-70 region 2 n=3 Tax=Bacteroides RepID=A5ZGX1_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EDM20680.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_030G1_scaffold_110_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25738..27000
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9EMA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY21339.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_030G1_scaffold_110_25
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27280..27534
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=A5ZGX3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ75044.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
family 7 carbohydrate esterase
L1_008_030G1_scaffold_110_26
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27527..28225)
DNA (699bp) protein (233aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=3 Tax=Bacteroides RepID=A5ZGX4_9BACE
L1_008_030G1_scaffold_110_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28272..30500)
DNA (2229bp) protein (743aa)
Formate C-acetyltransferase {ECO:0000313|EMBL:EDM20684.1}; EC=2.3.1.54 {ECO:0000313|EMBL:EDM20684.1};; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Formate C-acetyltransferase n=4 Tax=root RepID=A5ZGX5_9BACE
formate acetyltransferase
L1_008_030G1_scaffold_110_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30584..30826
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZGX6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20685.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L1_008_030G1_scaffold_110_29
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31096..32325
DNA (1230bp) protein (410aa)
Site-specific recombinase, phage integrase family n=5 Tax=Bacteroidales RepID=D4VJG2_9BACE
Transposase {ECO:0000313|EMBL:CDM06701.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
putative transposase
L1_008_030G1_scaffold_110_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32987..33520
DNA (534bp) protein (178aa)
Antirestriction protein n=4 Tax=Bacteroidales RepID=D4VJG0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN23471.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
antirestriction protein
Displaying items 1-30 of 60 in total

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